[MINC-users] mincbeast question

[Simon Eskildsen]

Did you run beast_normalize on your files before running mincbeast?
You can find an excellent introduction to BEaST here:
http://rstudio-pubs-static.s3.amazonaws.com/8431_d05daa5d49aa4cada417b6afc8ffd295.html

Simon

On Fri, May 19, 2017 at 6:10 PM, Divya Bolar <dbolar at nmr.mgh.harvard.edu>
wrote:

> Hi all!
>
> I have a pretty basic question re: mincbeast; I am just trying to input a
> minc file and get the brain extracted output (with the same resolution etc).
>
> I've tried various options, e.g.:
> mincbeast /opt/minc/share/beast-library-1.1 ./test.mnc test2.mnc
> and
> mincbeast  -no_mask /opt/minc/share/beast-library-1.1
> test_forMincbeast.mnc output.mnc
> and
> mincbeast  -same_resolution /opt/minc/share/beast-library-1.1
> test_forMincbeast.mnc output.mnc
>
> I always get the following error:
> ERROR! Mask dimension does not match image dimension!
>
> Any suggestions?
>
> Thanks so much!
> Div
>
> P.S.  I have a small example data set (100K); can send personally, but I
> think is getting blocked by user list.
>
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