[MINC-users] mincbeast question

[Vladimir S. FONOV]

Try:

mincresample -nearest ./test.mnc -like 
/opt/minc/share/beast-library-1.1/intersection_mask.mnc test_beast.mnc

and then mincbeast on test_beast.mnc

On 2017-05-19 12:10 PM, Divya Bolar wrote:
> Hi all!
>
> I have a pretty basic question re: mincbeast; I am just trying to input a minc file and get the brain extracted output (with the same resolution etc).
>
> I've tried various options, e.g.:
> mincbeast /opt/minc/share/beast-library-1.1 ./test.mnc test2.mnc
> and
> mincbeast  -no_mask /opt/minc/share/beast-library-1.1 test_forMincbeast.mnc output.mnc
> and
> mincbeast  -same_resolution /opt/minc/share/beast-library-1.1 test_forMincbeast.mnc output.mnc
>
> I always get the following error:
> ERROR! Mask dimension does not match image dimension!
>
> Any suggestions?
>
> Thanks so much!
> Div
>
> P.S.  I have a small example data set (100K); can send personally, but I think is getting blocked by user list.
>
>
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-- 
Best regards,

  Vladimir S. FONOV ~ vladimir.fonov <at> gmail.com