[MINC-users] Problems with volume/slice normalization and labels

[Vladimir S. FONOV]

itk_resample --labels <in> <out>  --like <template> --transform 
<transform.xfm>  for resampling

or, after running any standard minc tool (minccalc, mincmath, etc )

mincreshape -valid_range 0 X -image_range 0 X <in> <out>

where X in you maximum label id

On 16-02-16 12:09 PM, Gabriel A. Devenyi wrote:
> Hi minc-users,
>
> I have some labels that via some step in minc-toolkit had an introduction
> of volume and/or slice-selective normalization.
>
> This is causing serious issues *sometimes* in some processing.
>
> Can anyone recommend a way to successfully strip away all the normalization
> from the file so they are true labels?
>


-- 
Best regards,

  Vladimir S. FONOV ~ vladimir.fonov <at> gmail.com