[MINC-users] mincreeample transformation problem

[Vladimir S. FONOV]

Hello,

On 13-04-04 12:08 PM, Colin Shaun Hawco, M wrote:
> So just to recap, the process for registration is as such:
>
>     mincANTS T1.mnc -> MNI_model.mnc   == T1-model.xfm
>
>     mincANTS EPI.mnc -> T1.mnc  ==  EPI-T1.xfm
>
>     xfmconcat EPI-T1.xfm T1-model.xfm concat.xfm
>
>     mincresample -like EPI_model.mnc -transformation concat.xfm EPI.mnc
> EPI_normalised.mnc
>
> ?
>
> And if you resample like the MNI_model things are good but if you
> resample like the EPI_model things go akimbo?

So, isn't it what's intended :

T1-model.xfm  -maps from T1.mnc to MNI_model
and EPI-T1.xfm -maps from EPI to T1.mnc

so, concat.xfm - maps from EPI to MNI_model

how do you coregister EPI_model and MNI_model ?



-- 
Best regards,

  Vladimir S. FONOV ~ vladimir.fonov <at> gmail.com