[MINC-users] Classify

[Jon Erik Ween]

Dear minclist.

Sorry for the incremental posts, but then, how is one to learn??

Anyway, thanks to help from the list, I'm now in the possession of  
skull-stripped, talairach registered, lesion masked 3DT1 images of a  
group of patients and would like to tissue classify these volumes (and  
hopefully label major lobes etc) so I can calculate tissue and lesion  
volumes (globally and in particular lobes, etc). Running  
"classify" (or classify_clean, I can't figure out the difference  
between these two, exactly) complains that I don't have a tag file (or  
in the case of classify_clean, that the tags are not in the volume). I  
was thinking that "classify" used the specified model to figure out  
which voxels were which tissue, or do I need to manually tag voxels in  
each of the target volumes?

I, again, appreciate any guidance!

Cheers

Jon

Soli Deo Gloria

Jon Erik Ween, MD, MS
Scientist, Kunin-Lunenfeld Applied Research Unit
Director, Stroke Clinic, Brain Health Clinic, Baycrest Centre
Assistant Professor, Dept. of Medicine, Div. of Neurology
     University of Toronto Faculty of Medicine

Kimel Family Building, 6th Floor, Room 644
Baycrest Centre
3560 Bathurst Street
Toronto, Ontario M6A 2E1
Canada

Phone: 416-785-2500 x3648
Fax: 416-785-2484
Email: jween at klaru-baycrest.on.ca


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