[MINC-users] colour_object vs. brain-view

[Mishkin Derakhshan]

Hi,

So with some help from Claude we figured out that the culprit was the
stats.txt file.
It seems the file has a trailing space at the end of every line,
something which it seems brain-view has troubles reading.
If you just eliminate the space at the end of every line then it works
fine. Perhaps this can be incorporated into the next version of
brain-view.

mishkin


On Tue, Oct 7, 2008 at 10:53 PM, Kelvin Mok <mok at bic.mni.mcgill.ca> wrote:
> Isn't the latter (in the good vs bad) just the addition of the wireframe
> mesh (vertices)?
>
> Or are you referring to the blackout stuff around the lateral
> ventricles? In that case, there are supposed to be no vertices in this
> area (I believe), so it is likely that brain view performs that
> interpolation in this area, while colour_object does not do such.
>
> Kelvin
>
> Mishkin Derakhshan wrote:
>> Hi,
>> Usually, if I do:
>>
>> brain-view object.obj stats.txt
>>
>> or if i do
>>
>> colour_object object.obj stats.txt coloured_object.obj spectral 0 5
>> brain-view coloured_object.obj
>>
>> then, visually I get the same results.
>>
>> I preface this with usually cause I am getting cases where they do not.
>>
>> Screenshot here:
>> http://www.bic.mni.mcgill.ca/users/mishkin/good_bad.png
>>
>> Data here:
>> http://www.bic.mni.mcgill.ca/users/mishkin/object.obj.gz
>> http://www.bic.mni.mcgill.ca/users/mishkin/stats.txt
>> http://www.bic.mni.mcgill.ca/users/mishkin/coloured_object.obj.gz
>>
>> Is this a bug or what?
>>
>> thanks,
>> mishkin
>> _______________________________________________
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>>
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