[MINC-users] Automated Trimming

[D. Louis Collins]

Eric,

Stephen Frey (MNI) and I are working on a 'mritotal' package for monkey 
brains with a standard model, coordinate system, and brain mask.  
Should be ready in 2-3 weeks if you want to wait.

-Louis

On Jun 22, 2006, at 4:30 PM, Faden, Eric (NIH/NIMH) [F] wrote:

> I am working on a script to generate brainmasks for a set of macaque 
> scans we have, but since the scans have different amounts of neck in 
> them my script is having some issues.  I was wondering if there is a 
> quick way using minccalc or something to draw a circular mask and cut 
> everything outside of it?  or if anyone has a trick for creating a 
> very gross mask I could use to remove the neck?
>
> -Eric
>
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