[Loris-dev] Loris

[Christine Rogers]

Hi Ayshwarya,
I'm replying-all for community benefit, and so that team members can
provide additional answers --

It's great that you've already installed 22.0.1, and we recommend you
install the most recent release - 23.0.4 -  since we will support that best
for any questions you have.

To start, install 23.0.4 on your new VM.  Create a mysql dump of the old
database, copy that to the new VM, and source it there. Then follow the
release upgrade steps (as you found in our wiki page
<https://github.com/aces/Loris/wiki/Updating-your-LORIS>) and source
every release
upgrade patch <https://github.com/aces/Loris/tree/main/SQL/Release_patches> in
order to bring the old database up to date.  Please follow the Release notes
<https://github.com/aces/Loris/releases> along the way for any additional
steps or scripts.   It's also a good idea to double-check your dependency
versions --

Let us know if these are the steps you followed, and then send us
output/error messages you're getting. e.g. for the front end, please check
the apache error logs.

A few additional questions about the old project:
- How much data do you have?  ( both gb of imaging files, and number of
candidates/visits/instruments).
- Are there any code customizations
<https://github.com/aces/Loris/wiki/Code-Customization> in the
project/libraries and project/templates directory that override the LORIS
codebase?  This can include new modules or just changes to modules --
consult your project's specific documentation, so you can plan to update
these functionalities for the current LORIS architecture.

Best,
Christine







On Mon, Jul 19, 2021 at 4:30 PM Jagadeesan, Ayshwarya <ayshjag at med.umich.edu>
wrote:

> Hi Christine,
>
>
> Thank you for your reply.
>
>
> The old version I want to update is 14.12.1
>
> The new version is  the new LORIS ,that I hosted in a new server, the
> version Loris version is v22.0.1
>
> I tried '*assign_missing_instruments.php' * script. The script returns me
> nothing, since it is a brand new database.
>
>
> Please kindly let me know what should be done. Any video explanation will
> also help.
>
> Thanks,
>
> Ayshwarya.J
>
>
> ------------------------------
> *From:* Christine Rogers <rogers at bic.mni.mcgill.ca>
> *Sent:* Monday, July 19, 2021 4:10:35 PM
> *To:* Ayshwarya Jagadeesan
> *Cc:* loris-dev at bic.mni.mcgill.ca
> *Subject:* Re: [Loris-dev] Loris
>
> *External Email - Use Caution *
> Hi Ayshwarya,
> Thanks for reaching out, and glad to hear you're updating an existing
> LORIS to include some of our new features.
>
> Could you kindly let us know a few things to start  --
> What version of LORIS did you upgrade from, and to?  (e.g .19.0.2 to
> 23.0.4 )
>
> If you try running the *assign_missing_instruments.php *script (under the
> tools directory), does it identify the missing instruments correctly?
> If not, your battery may not be completely configured.  Let us know a
> specific example and what output or error messaging you're seeing,
> including in the apache error log.
>
> In case you were wondering about the upgrade process, let us know --:
> - Did you follow the release upgrade steps for each incremental release?
> (this includes running patches, updating dependencies and sometimes
> scripts). You'll likely want to note in particular any steps impacting
> instrument battery definition.
> - Have you updated php and run npm ?
>
> Thanks,
> Christine
> on behalf of the LORIS team
>
>
>
>
> On Mon, Jul 19, 2021 at 3:57 PM Ayshwarya Jagadeesan <ayshjag at umich.edu>
> wrote:
>
>> Hi,
>>
>> I am trying to update from an very old version of Loris to newer version
>> of Loris. The newer version has lot of me functionalities. I tried
>> following the wiki documentation ,I was able to create the instruments, but
>> was not able to populate the instrument for the visit for a particular
>> candidate.
>> I have a feel I am missing something.Any help would be greatly
>> appreciated.
>> Thanks,
>> Ayshwarya.J
>> _______________________________________________
>> Loris-dev mailing list
>> Loris-dev at bic.mni.mcgill.ca
>> https://mailman.bic.mni.mcgill.ca/mailman/listinfo/loris-dev
>>
>
>
> --
> Research Project Officer
> christine.rogers at mcgill.ca
> McGill Centre for Integrative Neuroscience | MCIN.ca
> Montreal Neurological Institute-Hospital
> McGill University | Montreal | Canada
>
> **********************************************************
> Electronic Mail is not secure, may not be read every day, and should not
> be used for urgent or sensitive issues
>


-- 
Research Project Officer
christine.rogers at mcgill.ca
McGill Centre for Integrative Neuroscience | MCIN.ca
Montreal Neurological Institute-Hospital
McGill University | Montreal | Canada
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