[Loris-dev] Pipeline Launch for BIDS datasets

[Cecile Madjar]

Hi Alfredo,

You will find an example of the config file in the following link:
https://github.com/aces/Loris-MRI/blob/main/dicom-archive/database_config_template.py


Indeed, this is a python-based config file, which is different from the
prod file that is perl-based.

Hope this helps,

Cécile

On Mon, Apr 19, 2021 at 4:38 PM Morales Pinzon, Alfredo <
AMORALESPINZON at bwh.harvard.edu> wrote:

> Dear LorisDev team,
>
> In the section “5.2 - Pipeline Launch for BIDS datasets
> <https://github.com/aces/Loris-MRI/blob/main/docs/05-PipelineLaunchOptions.md#52---pipeline-launch-for-bids-datasets>”
> the command line bids_import.py requires the option -p which is defined as
>
> -p, --profile        : name of the python database config file in dicom-archive/.loris-mri
>
> In the example provided this option has the value “database_config.py”, is
> this actually a python file? Where can I find it? How can I create it? The
> only file I have always had in .loris-mri is prod.
>
> Thank you in advance for your help.
>
> Regards,
> Alfredo.
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