<div dir="ltr">Hi Alfredo,<div><br></div><div>You will find an example of the config file in the following link: <a href="https://github.com/aces/Loris-MRI/blob/main/dicom-archive/database_config_template.py">https://github.com/aces/Loris-MRI/blob/main/dicom-archive/database_config_template.py</a> </div><div><br></div><div>Indeed, this is a python-based config file, which is different from the prod file that is perl-based.</div><div><br></div><div>Hope this helps,</div><div><br></div><div>Cécile</div></div><br><div class="gmail_quote"><div dir="ltr" class="gmail_attr">On Mon, Apr 19, 2021 at 4:38 PM Morales Pinzon, Alfredo <<a href="mailto:AMORALESPINZON@bwh.harvard.edu">AMORALESPINZON@bwh.harvard.edu</a>> wrote:<br></div><blockquote class="gmail_quote" style="margin:0px 0px 0px 0.8ex;border-left:1px solid rgb(204,204,204);padding-left:1ex">



<div style="overflow-wrap: break-word;">
Dear LorisDev team,
<div><br>
</div>
<div>In the section “<a href="https://github.com/aces/Loris-MRI/blob/main/docs/05-PipelineLaunchOptions.md#52---pipeline-launch-for-bids-datasets" target="_blank">5.2 - Pipeline Launch for BIDS datasets</a>” the command line bids_import.py requires the option
 -p which is defined as </div>
<div>
<pre style="box-sizing:border-box;font-family:SFMono-Regular,Consolas,"Liberation Mono",Menlo,monospace;font-size:13.6px;margin-top:0px;margin-bottom:0px;padding:16px;overflow:auto;line-height:1.45;border-radius:6px;word-break:normal;color:rgb(36,41,46);font-variant-ligatures:normal"><pre style="box-sizing:border-box;font-family:SFMono-Regular,Consolas,"Liberation Mono",Menlo,monospace;font-size:13.6px;margin-top:0px;margin-bottom:0px;padding:16px;overflow:auto;line-height:1.45;border-radius:6px;word-break:normal;font-variant-ligatures:normal">-p, --profile        <span style="box-sizing:border-box">:</span> name of the python database config file <span style="box-sizing:border-box">in</span> dicom-archive/.loris-mri</pre></pre>
</div>
<div>In the example provided this option has the value “database_config.py”, is this actually a python file? Where can I find it? How can I create it? The only file I have always had in .loris-mri is prod.</div>
<div><br>
</div>
<div>Thank you in advance for your help.</div>
<div><br>
</div>
<div>Regards,</div>
<div>Alfredo.</div>
</div>

_______________________________________________<br>
Loris-dev mailing list<br>
<a href="mailto:Loris-dev@bic.mni.mcgill.ca" target="_blank">Loris-dev@bic.mni.mcgill.ca</a><br>
<a href="https://mailman.bic.mni.mcgill.ca/mailman/listinfo/loris-dev" rel="noreferrer" target="_blank">https://mailman.bic.mni.mcgill.ca/mailman/listinfo/loris-dev</a><br>
</blockquote></div>