[Loris-dev] Inquiry regarding conversion of DTI in MINC to NIfTI

[Payabvash, Sam]

Hi,

I was wondering if you can kindly help me with conversion of DTI files in MINC format to NIfTI  format and extraction of bval and bvec files.

I found your LORIS MRI Release v20.1.0 on git hub (https://github.com/aces/Loris-MRI/pull/335); and I followed the instruction on "https://github.com/aces/Loris-MRI" to instal the package on our Ubuntu platform.

But can not figure out how to run the "make_niff" function from the MRI.pm in a shell script.
The MRI.pm is in the uploadNeuroDB/NeuroDB directory, and I tried :

$ perl -MMRI -e 'MRI::make_nii" dti.mnc

But it didn't work.

I sincerely appreciate your help.

Best regards,
Sam

_____________________________
Sam (Seyedmehdi) Payabvash, MD
Assistant Professor of Radiology
Yale School of Medicine
Email :  sam.payabvash at yale.edu<mailto:sam.payabvash at yale.edu>





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