[MINC-users] Could NOT find JPEG (missing: JPEG_LIBRARY JPEG_INCLUDE_DIR)

[Vladimir S. Fonov]

Latest version of dcm2mnc needs libjpeg and libopenjpeg which need to be 
present.

On 2017-02-17 04:05 AM, Steffen Bollmann wrote:
> Hi All,
>
> I try to install https://github.com/BIC-MNI/minc-toolkit-v2 by following
> the readme on an Ubuntu 16.04, but I get this error:
>
> cmake .. \
>> -DCMAKE_BUILD_TYPE:STRING=Release   \
>> -DCMAKE_INSTALL_PREFIX:PATH=/opt/minc/1.9.13   \
>> -DMT_BUILD_ABC:BOOL=ON   \
>> -DMT_BUILD_ANTS:BOOL=ON   \
>> -DMT_BUILD_C3D:BOOL=ON   \
>> -DMT_BUILD_ELASTIX:BOOL=ON   \
>> -DMT_BUILD_IM:BOOL=OFF   \
>> -DMT_BUILD_ITK_TOOLS:BOOL=ON   \
>> -DMT_BUILD_LITE:BOOL=OFF   \
>> -DMT_BUILD_SHARED_LIBS:BOOL=ON   \
>> -DMT_BUILD_VISUAL_TOOLS:BOOL=ON   \
>> -DMT_USE_OPENMP:BOOL=ON   \
>> -DUSE_SYSTEM_FFTW3D:BOOL=OFF   \
>> -DUSE_SYSTEM_FFTW3F:BOOL=OFF   \
>> -DUSE_SYSTEM_GLUT:BOOL=OFF   \
>> -DUSE_SYSTEM_GSL:BOOL=OFF   \
>> -DUSE_SYSTEM_HDF5:BOOL=OFF   \
>> -DUSE_SYSTEM_ITK:BOOL=OFF   \
>> -DUSE_SYSTEM_NETCDF:BOOL=OFF   \
>> -DUSE_SYSTEM_NIFTI:BOOL=OFF   \
>> -DUSE_SYSTEM_PCRE:BOOL=OFF   \
>> -DUSE_SYSTEM_ZLIB:BOOL=OFF
> -- Could NOT find JPEG (missing:  JPEG_LIBRARY JPEG_INCLUDE_DIR)
> HDF5_DIR=/home/minc/minc-toolkit-v2/build/external//opt/minc/1.9.13/share/cmake/hdf5
> HDF5_LIBRARY=/home/minc/minc-toolkit-v2/build/external//opt/minc/1.9.13/lib/libhdf5.so
> HDF5_CPP_LIBRARY=/home/minc/minc-toolkit-v2/build/external//opt/minc/1.9.13/lib/libhdf5_cpp.so
> HDF5_HL_LIBRARY=/home/minc/minc-toolkit-v2/build/external//opt/minc/1.9.13/lib/libhdf5_hl.so
> HDF5_HL_CPP_LIBRARY=/home/minc/minc-toolkit-v2/build/external//opt/minc/1.9.13/lib/libhdf5_hl_cpp.so
> CMake Error: The following variables are used in this project, but they are
> set to NOTFOUND.
> Please set them or make sure they are set and tested correctly in the CMake
> files:
> JPEG_INCLUDE_DIR (ADVANCED)
>    used as include directory in directory /home/minc/minc-toolkit-v2/xdisp
>    used as include directory in directory /home/minc/minc-toolkit-v2/xdisp
>    used as include directory in directory /home/minc/minc-toolkit-v2/xdisp
>    used as include directory in directory /home/minc/minc-toolkit-v2/xdisp
>    used as include directory in directory /home/minc/minc-toolkit-v2/xdisp
>    used as include directory in directory /home/minc/minc-toolkit-v2/xdisp
>    used as include directory in directory /home/minc/minc-toolkit-v2/xdisp
>    used as include directory in directory /home/minc/minc-toolkit-v2/xdisp
>    used as include directory in directory /home/minc/minc-toolkit-v2/xdisp
>    used as include directory in directory /home/minc/minc-toolkit-v2/xdisp
>    used as include directory in directory
> /home/minc/minc-toolkit-v2/xdisp/olgx
>    used as include directory in directory
> /home/minc/minc-toolkit-v2/xdisp/olgx
>    used as include directory in directory
> /home/minc/minc-toolkit-v2/xdisp/olgx
>    used as include directory in directory
> /home/minc/minc-toolkit-v2/xdisp/olgx
>    used as include directory in directory
> /home/minc/minc-toolkit-v2/xdisp/olgx
>    used as include directory in directory
> /home/minc/minc-toolkit-v2/xdisp/olgx
>    used as include directory in directory
> /home/minc/minc-toolkit-v2/xdisp/olgx
>    used as include directory in directory
> /home/minc/minc-toolkit-v2/xdisp/olgx
>    used as include directory in directory
> /home/minc/minc-toolkit-v2/xdisp/olgx
>    used as include directory in directory
> /home/minc/minc-toolkit-v2/xdisp/olgx
>    used as include directory in directory
> /home/minc/minc-toolkit-v2/xdisp/EZWGL-1.50
>    used as include directory in directory
> /home/minc/minc-toolkit-v2/xdisp/EZWGL-1.50
>    used as include directory in directory
> /home/minc/minc-toolkit-v2/xdisp/EZWGL-1.50
>    used as include directory in directory
> /home/minc/minc-toolkit-v2/xdisp/EZWGL-1.50
>    used as include directory in directory
> /home/minc/minc-toolkit-v2/xdisp/EZWGL-1.50
>    used as include directory in directory
> /home/minc/minc-toolkit-v2/xdisp/EZWGL-1.50
>    used as include directory in directory
> /home/minc/minc-toolkit-v2/xdisp/EZWGL-1.50
>    used as include directory in directory
> /home/minc/minc-toolkit-v2/xdisp/EZWGL-1.50
>    used as include directory in directory
> /home/minc/minc-toolkit-v2/xdisp/EZWGL-1.50
>    used as include directory in directory
> /home/minc/minc-toolkit-v2/xdisp/EZWGL-1.50
>
> -- Configuring incomplete, errors occurred!
> See also "/home/minc/minc-toolkit-v2/build/CMakeFiles/CMakeOutput.log".
> See also "/home/minc/minc-toolkit-v2/build/CMakeFiles/CMakeError.log".
>
> What am I doing wrong here :?
>
> Thanks
> Steffen
> _______________________________________________
> MINC-users at bic.mni.mcgill.ca
> http://www.bic.mni.mcgill.ca/mailman/listinfo/minc-users
>