[MINC-users] Error compiling MINC-Tools on RedHat
Paul GRAVEL
pgravel at bic.mni.mcgill.ca
Thu Feb 2 01:00:19 EST 2017
Dear All,
I am currently trying to compile the MINC tools on RedHat:
lsb_release -a
LSB Version:
:base-4.0-amd64:base-4.0-noarch:core-4.0-amd64:core-4.0-noarch:graphics-4.0-amd64:graphics-4.0-noarch:printing-4.0-amd64:printing-4.0-noarch
Distributor ID: RedHatEnterpriseAS
Description: Red Hat Enterprise Linux AS release 6 (Update 5)
Release: 6
Codename: Update5
I have followed the instructions on:
https://github.com/BIC-MNI/minc-toolkit
git clone --recursive git://github.com/BIC-MNI/minc-toolkit.git
minc-toolkit
cd minc-toolkit
mkdir build && cd build
ccmake ..
I have installed (I hope!) all the dependencies (BISON, FLEX, GLUT);
Perl, libxi, and libxmu is already on the system.
And the packages (NETCDF, HDF5, PCRE, GSL, FFTW3); zlib is already on the
system.
That being said, when I run: make
It gets to 94% and then I get this error:
[ 94%] Linking CXX executable mincnlm
CMakeFiles/mincnlm.dir/mincnlm.cpp.o: In function
`Exec(minc::simple_volume<float>&, float*, int*, double*, float*)':
mincnlm.cpp:(.text+0xb40): undefined reference to
`minc::noise_estimate(minc::simple_volume<float> const&, double&, bool,
bool)'
collect2: ld returned 1 exit status
make[2]: *** [EZminc/mincnlm/mincnlm] Error 1
make[1]: *** [EZminc/mincnlm/CMakeFiles/mincnlm.dir/all] Error 2
make: *** [all] Error 2
Any idea as to why?
As always, any help will be greatly appreciated!
Best Regards,
Paul
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