[MINC-users] Virtual machine that includes minc tools

[Paul GRAVEL]

Thanks Andrew, Alex and Pierre for such quick replies!

I am currently trying Andrew's suggestion; before reading you replies, I 
actually noticed Andrew's comment on the http://neuro.debian.net/ web 
page. Coincidence? I think not ;-)!

Best,

Paul


On Tue, 17 May 2016, Pierre Bellec wrote:

> Hi Paul,
>
> Not sure this will fit your objectives, but using a docker container may be
> an alternative to a VM (or you can deploy the container inside a VM as
> well, it's easier to update). Here is the minc-toolkit image we use in the
> lab, it's derived from an old Ubuntu 12.04. I don't think there is an
> official minc-toolkit repo on docker hub at this point
> https://hub.docker.com/r/simexp/minc-toolkit/
>
> FYI the build file is here:
> https://github.com/SIMEXP/Projects/tree/master/docker/minc-toolkit/1.9.2
>
> Best,
>
> Pierre
>
> Pierre Bellec
> Assistant professor ("adjoint sous octroi"), Department of computer science
> and operational research (DIRO <http://diro.umontreal.ca/>)
> Member, Centre de recherche de l'institut Universitaire de gériatrie de
> Montréal (CRIUGM <http://www.criugm.qc.ca/>)
> Member, Institute of Biomedical Engineering <http://www.igb.umontreal.ca/>
> Université de Montréal, Montréal, Canada
> Phone +1 514 713 5596
> Full coordinates on my home page
> <http://simexp-lab.org/brainwiki/doku.php?id=pierrebellec>
> Laboratory website <http://simexp-lab.org>.
>
> On Tue, May 17, 2016 at 10:10 PM, Alex Zijdenbos <zijdenbos at gmail.com>
> wrote:
>
>> I once built a VM "MINCbuntu" (still available at
>> http://packages.bic.mni.mcgill.ca/virtual-machines/), but that hasn't been
>> updated since 2009, so I'd suggest to follow Andrew's suggestion at this
>> point :-)
>>
>> -- A
>>
>>
>>
>> On Tue, May 17, 2016 at 10:01 PM, Andrew Janke <a.janke at gmail.com> wrote:
>>
>> > I'm sure I saw one pass through the minc-users mailing list a while back?
>> >
>> > I use the neurodebian VM and then
>> >
>> >    apt-get install minc-toolkit     (thanks Vlad!)
>> >
>> > a
>> >
>> >
>> > On 18 May 2016 at 11:58, Paul GRAVEL <pgravel at bic.mni.mcgill.ca> wrote:
>> > > Dear All,
>> > >
>> > > I want to prepare a virtual machine for VirtualBox that includes a
>> linux
>> > > version with the minc tools. But being lazy (;-)!), I was wondering if
>> > > anyone already had that and be willing to share.
>> > > Otherwise, any pointers on how to go about it (of course I would be
>> > willing
>> > > to share the finished product!)?
>> > >
>> > > Many thanks!
>> > >
>> > > Paul
>> > >
>> > > _______________________________________________
>> > > MINC-users at bic.mni.mcgill.ca
>> > > http://www.bic.mni.mcgill.ca/mailman/listinfo/minc-users
>> > _______________________________________________
>> > MINC-users at bic.mni.mcgill.ca
>> > http://www.bic.mni.mcgill.ca/mailman/listinfo/minc-users
>> >
>> >
>> _______________________________________________
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>> http://www.bic.mni.mcgill.ca/mailman/listinfo/minc-users
>>
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