[MINC-users] classify: how to use

[Andrew Janke]

Hi Pedro,

This is my approach:

   classify_clean \
         -tagdir <tags> \
         -tag_transform <image-to-tags.xfm> \
         input.mnc output.mnc

<tags> is a directory with the classify tags in it eg:

ls tags/
ntags_1000_bg.tag  ntags_1000_prob_90_nobg.tag


<image-to-tags.xfm> is a tranform from your native data space
(input.mnc) to the space of the tags. If you are using the ones in the
standard package this will be a transform from native space to the
icbm152 model.


a



On 3 May 2016 at 23:36, Pedro <ptcougopinto at gmail.com> wrote:
>
> Hi, everyone —
>
> What should be the minimum command line for classify? What are the inputs and output? I could´t figure out from -help. (Just found out that I´m not happy with registration based segmentation of my data).
>
> Thanks!
> Pedro
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