[MINC-users] Extract coord and voxel data

[Robert D. Vincent]

Easy enough to fix. I'll add this to my "todo" list and either add a
"coordinates" option to mincextract or other output options for minctotag.

    -bert

On Mon, May 2, 2016 at 11:08 AM, Pedro <ptcougopinto at gmail.com> wrote:

> Thanks, all. Exactly what I was looking for. However, voxel values are
> rounded to integer. I saw there is an old email thread from 2004 about this.
> > Em 30 de abr de 2016, à(s) 14:30, Soren Christensen <sorench at gmail.com>
> escreveu:
> >
> > Hi,
> > Alternatively I guess the output is implicitly ordered by voxel
> coordinate
> > (fastest to slowest varying dim I assume). So the actual output index is
> > the linear index of the voxel location and you then simply have to
> > translate the line number to the voxel coordinate with the appropriate
> > calculation.
> >
> > Soren
> >
> >
> > On Fri, Apr 29, 2016 at 7:44 PM, Robert D. Vincent <
> > robert.d.vincent at mcgill.ca> wrote:
> >
> >> Hi,
> >>
> >> There is a tool called minctotag, which does exactly that:
> >>
> >> minctotag file.mnc file.tag
> >>
> >> extracts all values and  into an MNI .tag format file, which is a fairly
> >> simple ASCII file. I think it outputs world coordinates rather than
> voxel
> >> coordinates, however.
> >>
> >>    -bert
> >>
> >>
> >>
> >> On Fri, Apr 29, 2016 at 9:28 PM, Pedro Telles Cougo Pinto <
> >> ptcougopinto at gmail.com> wrote:
> >>
> >>> Hi, everyone —
> >>>
> >>> Mincextract exports voxel value, but is it possible to also extract the
> >>> corresponding voxel coordinate data together with the scalar value?
> >>>
> >>> Thanks
> >>> Pedro
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> >>>
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