[MINC-users] nii2mnc

[Trisanna Sprung-Much]

Hello

I recently tried to use nii2mnc on some ex-vivo scans and the command seems
to fail. Any ideas as to why? I think it has to do with the format of my
nifti file?

many thanks

Trisanna

nii2mnc: Convert NIfTI-1 files to MINC format
usage: nii2mnc [options] filename.nii [filename.mnc]
 nii2mnc Merv_7T.nii Merv_7T.mnc
<nifti_image
  nifti_type = 'NIFTI-1+'
  header_filename = 'Merv_7T.nii'
  image_filename = 'Merv_7T.nii'
  image_offset = '352'
  ndim = '3'
  nx = '280'
  ny = '280'
  nz = '80'
  dx = '0.428571'
  dy = '0.428571'
  dz = '1.5'
  datatype = '4'
  datatype_name = 'INT16'
  nvox = '6272000'
  nbyper = '2'
  byteorder = 'LSB_FIRST'
  scl_slope = '1'
  scl_inter = '0'
  xyz_units = '2'
  xyz_units_name = 'mm'
  time_units = '8'
  time_units_name = 's'
  descrip = 'FSL5.0'
  num_ext = '0'
/>
Segmentation fault (core dumped)