[MINC-users] Multi-modal image registration

[Alex Zijdenbos]

Thanks, Vlad! I'm not sure how I always missed that already being
implemented in minctracc :-/ Perhaps I can blame the man page that doesn't
mention the -feature_vol option? ;-)

-- A

On Mon, Jan 11, 2016 at 9:44 AM, Vladimir S. FONOV <vladimir.fonov at gmail.com
> wrote:

> Hello Alex,
>
>
> 1. mintracc can do it, it's even implemented in nlfit_s ,
> see -sec_source -sec_target -sec_weight
> 2.  see https://gist.github.com/vfonov/d03db8794181a69a9e66  - it's out of
> data, since it uses mincANTS, it will work if you replace mincANTS with
> just  ANTS
>
> On Sun, Jan 10, 2016 at 4:25 PM, Alex Zijdenbos <zijdenbos at gmail.com>
> wrote:
>
> > Hi all,
> >
> > I am looking for a way to perform multi-modal image registration - i.e.,
> > perform linear+non-linear alignment while optimizing a similarity metric
> > simultaneously based on multiple input volumes. Two specific questions:
> >
> > 1) minctracc obviously doesn't do this. Is there any chance that anybody
> > has, or is working on, generalizing minctracc to multi-modal data?
> >
> > 2) ANTs does support this, so that may be one avenue to pursue; has
> anybody
> > perhaps 'translated' the more-or-less standard minctracc registration
> > protocols (e.g., nlfit_s) to comparable ANTs invocations?
> >
> > Any suggestions would be appreciated.
> >
> > Thanks,
> >
> > -- A
> > _______________________________________________
> > MINC-users at bic.mni.mcgill.ca
> > http://www.bic.mni.mcgill.ca/mailman/listinfo/minc-users
> >
>
>
>
> --
> Best regards,
>
>  Vladimir S. Fonov ~ vladimir <dot> fonov <at> gmail <dot> com
> _______________________________________________
> MINC-users at bic.mni.mcgill.ca
> http://www.bic.mni.mcgill.ca/mailman/listinfo/minc-users
>
>