[MINC-users] MINC-users Digest, Vol 123, Issue 8

[Robert D. Vincent]

Hi,

The tools that might be of interest are minctoraw and mincextract. Or you
can convert MINC files to NIfTI files with mnc2nii, if you have access to a
library that reads NIfTI-1 files.

The library paths depend on your specific platform and configuration, but
you are looking for libminc2 and/or libvolume_io2.

    -bert

On Sun, Nov 22, 2015 at 10:37 PM, Hemanth I (Hemambaradarahara Rao) <
hihemanth08 at gmail.com> wrote:

> Thank you Robert D. Vincent,
> The MINC toolkit includes several tools that can extract raw data from a
> MINC file.But I don't know which libraries are for what purpose ,
> can you help to in finding the info regarding these libraries usage and
> Please Let me know the procedure to include those libraries (giving path
> for library locations in IDE etc..) for reading and accessing pixels of
> minc images.
>
> [I am using Qt Creator(IDE) for c++ programming]
>
>
> Thank you minc users!!!
>
> On Sun, Nov 22, 2015 at 10:30 PM, <minc-users-request at bic.mni.mcgill.ca>
> wrote:
>
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> > Today's Topics:
> >
> >    1. Small Query (Hemanth I (Hemambaradarahara   Rao))
> >    2. Re: Small Query (Robert D. Vincent)
> >
> >
> > ----------------------------------------------------------------------
> >
> > Message: 1
> > Date: Sun, 22 Nov 2015 10:05:43 +0530
> > From: "Hemanth I (Hemambaradarahara   Rao)" <hihemanth08 at gmail.com>
> > To: minc-users at bic.mni.mcgill.ca
> > Subject: [MINC-users] Small Query
> > Message-ID:
> >         <CAH7=K=
> > XQRYkSyG12W+M7bn2Vk0w42j4F+z0G7do_8n0nvOgNkA at mail.gmail.com>
> > Content-Type: text/plain; charset=UTF-8
> >
> > *Dear minc users,*
> > *Currently I'm trying to do image fusion of T1,T2 and PD weighted images
> of
> > brain.*
> > *But here I'm unable to use those MINC Tool kit libraries along with
> opencv
> > libraries for image processing applications.*
> > *Can you briefly explain me the procedure to use those libraries for mnic
> > format image reading and accessing pixel values*
> > *then i will try to access along with Opencv libraries.*
> > *It will be very helpful for my project if are able to guide me
> > in accessing mnic image pixels.*
> >
> > *?**Thank you  **?*
> >
> > --
> > Best Regards
> > Hemanth Indlamuri
> >
> >
> > ------------------------------
> >
> > Message: 2
> > Date: Sun, 22 Nov 2015 07:43:38 -0500
> > From: "Robert D. Vincent" <robert.d.vincent at mcgill.ca>
> > To: MINC users mailing list <minc-users at bic.mni.mcgill.ca>
> > Subject: Re: [MINC-users] Small Query
> > Message-ID:
> >         <
> > CAAd5DeSYg9K2+R4t7eJvV4JZ47o7oNTDn+RY+Jxq1KTrU2wN_g at mail.gmail.com>
> > Content-Type: text/plain; charset="utf-8"
> >
> > Hi,
> >
> > I'm not familiar with OpenCV, so I can only give some general advice.
> >
> > The MINC toolkit includes several tools that can extract raw data from a
> > MINC file, or convert a MINC file to another format.
> >
> > If you are programming in C (or C++), one of the easiest ways to read a
> > MINC file is with the "volume_io" library that is part of the MINC
> library.
> > I've enclosed a simple example.
> >
> >     -bert
> >
> > On Sat, Nov 21, 2015 at 11:35 PM, Hemanth I (Hemambaradarahara Rao) <
> > hihemanth08 at gmail.com> wrote:
> >
> > > *Dear minc users,*
> > > *Currently I'm trying to do image fusion of T1,T2 and PD weighted
> images
> > of
> > > brain.*
> > > *But here I'm unable to use those MINC Tool kit libraries along with
> > opencv
> > > libraries for image processing applications.*
> > > *Can you briefly explain me the procedure to use those libraries for
> mnic
> > > format image reading and accessing pixel values*
> > > *then i will try to access along with Opencv libraries.*
> > > *It will be very helpful for my project if are able to guide me
> > > in accessing mnic image pixels.*
> > >
> > > *?**Thank you  **?*
> > >
> > > --
> > > Best Regards
> > > Hemanth Indlamuri
> > > _______________________________________________
> > > MINC-users at bic.mni.mcgill.ca
> > > http://www.bic.mni.mcgill.ca/mailman/listinfo/minc-users
> > >
> >
> > ------------------------------
> >
> > _______________________________________________
> > MINC-users mailing list
> > MINC-users at bic.mni.mcgill.ca
> > http://www.bic.mni.mcgill.ca/mailman/listinfo/minc-users
> >
> >
> > End of MINC-users Digest, Vol 123, Issue 8
> > ******************************************
> >
>
>
>
> --
> Best Regards
> Hemanth Indlamuri
> _______________________________________________
> MINC-users at bic.mni.mcgill.ca
> http://www.bic.mni.mcgill.ca/mailman/listinfo/minc-users
>