[MINC-users] build almost everything minc Makefile and git repository for EZminc

Luis Concha lconcha at gmail.com
Mon Mar 14 20:10:37 EDT 2011


Hello all.

I have successfully compiled the minc tools using Vlad's fantastic new
Makefile. Thanks to Pierre B. for updating the wiki and Vlad for
updating the file.

I am now trying to compile the tools for a cluster using Red Hat
Enterprise Linux AS release 4. I am getting the error of not having
permissions to write to /usr/local (of course I don't). I was my
understanding that this new makefile did not have to write anything
outside of the local user's directories. Perhaps I am mistaken, as I
see an INSTALLDIRS=site in the output. Is there a way around this?

The error occurs when installing Getopt-Tabular. Any clues? See below
for the tail of the make output.

Thanks a lot.

Luis




17:17:51 (247.94 KB/s) -
`/global/home/lconcha_g/lconcha/temp/src/Getopt-Tabular-0.3.tar.gz'
saved [26453/26453]

cd /global/home/lconcha_g/lconcha/temp/src && tar zxf
/global/home/lconcha_g/lconcha/temp/src/Getopt-Tabular-0.3.tar.gz
touch /global/home/lconcha_g/lconcha/temp/src/Getopt-Tabular-0.3
cd /global/home/lconcha_g/lconcha/temp/src/Getopt-Tabular-0.3 && \
perl ./Makefile.PL SITEPREFIX=/global/home/lconcha_g/lconcha/minc
INSTALLDIRS=site
INSTALLSITELIB=/global/home/lconcha_g/lconcha/minc/perl
INSTALLSITEBIN=/global/home/lconcha_g/lconcha/minc/bin \
	INSTALLSITEMAN1DIR=/global/home/lconcha_g/lconcha/minc
INSTALLSITEMAN3DIR=/global/home/lconcha_g/lconcha/minc && \
make && \
make install
Checking if your kit is complete...
Looks good
Writing Makefile for Getopt::Tabular
make[1]: Entering directory
`/global/home/lconcha_g/lconcha/temp/src/Getopt-Tabular-0.3'
cp Tabular.pod blib/lib/Getopt/Tabular.pod
cp Tabular.pm blib/lib/Getopt/Tabular.pm
Manifying blib/man3/Getopt::Tabular.3pm
make[1]: Leaving directory
`/global/home/lconcha_g/lconcha/temp/src/Getopt-Tabular-0.3'
make[1]: Entering directory
`/global/home/lconcha_g/lconcha/temp/src/Getopt-Tabular-0.3'
Warning: You do not have permissions to install into
/usr/lib64/perl5/site_perl/5.8.5/x86_64-linux-thread-multi at
/usr/lib/perl5/5.8.5/ExtUtils/Install.pm line 114.
Installing /global/home/lconcha_g/lconcha/minc/perl/Getopt/Tabular.pod
Installing /global/home/lconcha_g/lconcha/minc/perl/Getopt/Tabular.pm
Installing /global/home/lconcha_g/lconcha/minc/Getopt::Tabular.3pm
mkdir /usr/lib64/perl5/site_perl/5.8.5/x86_64-linux-thread-multi/auto/Getopt:
Permission denied at /usr/lib/perl5/5.8.5/ExtUtils/Install.pm line 207
make[1]: *** [pure_site_install] Error 255
make[1]: Leaving directory
`/global/home/lconcha_g/lconcha/temp/src/Getopt-Tabular-0.3'
make: *** [/global/home/lconcha_g/lconcha/minc/perl/Getopt/Tabular.pm] Error 2


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