[MINC-users] MINC and ITK

Leila Baghdadi baghdadi at phenogenomics.ca
Fri Jun 3 12:12:31 EDT 2011



----- Original Message -----
From: Leila Baghdadi <baghdadi at phenogenomics.ca>
Sent: Fri, 6/3/2011 12:00pm
To: MINC development discussion & planning <minc-development at bic.mni.mcgill.ca>
Subject: Re: [MINC-development] MINC and ITK

Hi everyone,

Just thought of sending an update to the minc community regarding support for MINC in ITK.

My code (ITKMINC2IO) (originally written in 2008 and not maintained, blame it on maternity leave(s)!), can only support MINC2 files and right now requires work as various things have changed in ITK since then,

I am in the process of rewriting some parts of the above, and will resubmit a new version to the ITK-journal once I have it completed! (I do want to resubmit this code as it makes exclusive minc2 api calls )

meanwhile,

The code of Vladimir (EZminc), can read both formats and is much more up-to-date,

Please send me any questions or concerns

Leila

----- Original Message -----
From: Andrew Janke <a.janke at gmail.com>
Sent: Sun, 5/15/2011 8:29pm
To: MINC development discussion & planning <minc-development at bic.mni.mcgill.ca>
Subject: Re: [MINC-development] MINC and ITK

> That's my understanding as well - we (us Toronto folks, that is), seem to be the happiest in the MINC community to discard MINC1 compatibility,

Pick me too!  I have been MINC2 only for at least the last 3 years,
the impending MINC2.2 release will finally drive the final nail in the
MINC1 coffin. The default will be to write out MINC2 files
irrespective of what the input was.  I don't plan to add a -1 flag to
all the binaries to write out MINC1 and instead will only add a -1
flag to mincconvert for the sticklers.

For those asking why, I have had requests for this from users none of
whom were from the BIC!  Perhaps I should open a separate thread about
this on minc-dev but expect to see my commits for this on github
shortly.


a
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