[MINC-users] nu_correct (volume_stats) assertion failed

[Burt Crépeault]

Ah, new builds, old libs... I used the exact same compiler flags, as per
your recommendations, so everything should work. Perhaps I should try
another build using 2.0.15 as a basis. Still, it'd be nice to know what the
problem is with 2.0.18.

Burt.




On Mon, May 17, 2010 at 12:31, Alexandre CARMEL-VEILLEUX <
acveilleux at mrs.mni.mcgill.ca> wrote:

> I've just tested a build of N3-1.11.0 with ebtks-1.6.2 on my build
> environment (Mac OS X 10.5.8, most of the libs as per the package I made
> last year, minc 2.0.15).
>
> 1.10.1 with 1.6.1 works for me
> 1.11.0 with 1.6.1 works for me
> 1.11.0 with 1.6.2 works for me
>
> Where works for me means: (a) -help works and (b) it prints out the
> stats of a random minc file I had on hand.
>
> I used this to build both tools:
>
> ./configure CFLAGS="-O2 -arch x86_64 -m64" CXXFLAGS="-O2 -arch x86_64 -m64"
> \
> --prefix=//localscratch/compile/newtemp \
> --with-build-path=/localscratch/compile/newtemp:/usr/local/bic \
> --with-minc2
>
> /locascratch/compile/newtemp is where I built the new EBTKS.
>
>
> This is very annoying,
>
> Alex
>
> On Mon, May 17, 2010 at 12:12:02PM -0400, Burt Cr?peault wrote:
> > Date: Mon, 17 May 2010 12:12:02 -0400
> > From: Burt Cr?peault <burt.crepeault at crulrg.ulaval.ca>
> > Subject: Re: [MINC-users] nu_correct (volume_stats) assertion failed
> > To: MINC users mailing list <minc-users at bic.mni.mcgill.ca>
> >
> > I've put the original file here:
> >
> https://sodium.crulrg.ulaval.ca/WX/images.13671.bl.MR.T1.MP-RAGE.1034.1.10007.[mnc.rsh][mnc.dns].Br.80_p2.mnc.gz
> >
> > Andrew: yes, running a dry volume_stats command still fails.
> >
> > Burt.
> >
> >
> >
> >
> > On Mon, May 17, 2010 at 11:56, Andrew Janke <a.janke at gmail.com> wrote:
> >
> > > > Can't wait to get this OS X 64-bit build going... Man this is
> tough...
> > > > (sigh)
> > >
> > > Welcome to the EBTKS ornery beast! :)  Well actually that probably
> > > isn't fair on Alex, it's at least half C++'s fault for continually
> > > changing the spec!.  (but I digress...)
> > >
> > > > neon:Darwin:# volume_stats
> > > > Assertion failed at line 32 in file templates/Pool.cc
> > > >
> > > > I believe that Pool.cc file belongs to EBTKS, I'm using version
> 1.6.2. I
> > > > checked the output generated during its build, no apparent problem
> there.
> > > I
> > > > built it again, just to make sure, and did the same for N3.
> Everything
> > > went
> > > > well but the failed assertion error persists.
> > >
> > > > Any ideas?
> > >
> > > And this is just running volume_stats by itself?  ie: it was trying to
> > > produce the -help output?
> > >
> > >
> > > --
> > > Andrew Janke
> > > (a.janke at gmail.com || http://a.janke.googlepages.com/)
> > > Canberra->Australia    +61 (402) 700 883
> > > _______________________________________________
> > > MINC-users at bic.mni.mcgill.ca
> > > http://www.bic.mni.mcgill.ca/mailman/listinfo/minc-users
> > >
> > _______________________________________________
> > MINC-users at bic.mni.mcgill.ca
> > http://www.bic.mni.mcgill.ca/mailman/listinfo/minc-users
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