[MINC-users] nu_correct (volume_stats) assertion failed

Alexandre CARMEL-VEILLEUX acveilleux at mrs.mni.mcgill.ca
Mon May 17 12:31:29 EDT 2010


I've just tested a build of N3-1.11.0 with ebtks-1.6.2 on my build
environment (Mac OS X 10.5.8, most of the libs as per the package I made
last year, minc 2.0.15). 

1.10.1 with 1.6.1 works for me
1.11.0 with 1.6.1 works for me
1.11.0 with 1.6.2 works for me

Where works for me means: (a) -help works and (b) it prints out the
stats of a random minc file I had on hand.

I used this to build both tools:

./configure CFLAGS="-O2 -arch x86_64 -m64" CXXFLAGS="-O2 -arch x86_64 -m64" \
--prefix=//localscratch/compile/newtemp \
--with-build-path=/localscratch/compile/newtemp:/usr/local/bic \
--with-minc2

/locascratch/compile/newtemp is where I built the new EBTKS.


This is very annoying,

Alex

On Mon, May 17, 2010 at 12:12:02PM -0400, Burt Cr?peault wrote:
> Date: Mon, 17 May 2010 12:12:02 -0400
> From: Burt Cr?peault <burt.crepeault at crulrg.ulaval.ca>
> Subject: Re: [MINC-users] nu_correct (volume_stats) assertion failed
> To: MINC users mailing list <minc-users at bic.mni.mcgill.ca>
> 
> I've put the original file here:
> https://sodium.crulrg.ulaval.ca/WX/images.13671.bl.MR.T1.MP-RAGE.1034.1.10007.[mnc.rsh][mnc.dns].Br.80_p2.mnc.gz
> 
> Andrew: yes, running a dry volume_stats command still fails.
> 
> Burt.
> 
> 
> 
> 
> On Mon, May 17, 2010 at 11:56, Andrew Janke <a.janke at gmail.com> wrote:
> 
> > > Can't wait to get this OS X 64-bit build going... Man this is tough...
> > > (sigh)
> >
> > Welcome to the EBTKS ornery beast! :)  Well actually that probably
> > isn't fair on Alex, it's at least half C++'s fault for continually
> > changing the spec!.  (but I digress...)
> >
> > > neon:Darwin:# volume_stats
> > > Assertion failed at line 32 in file templates/Pool.cc
> > >
> > > I believe that Pool.cc file belongs to EBTKS, I'm using version 1.6.2. I
> > > checked the output generated during its build, no apparent problem there.
> > I
> > > built it again, just to make sure, and did the same for N3. Everything
> > went
> > > well but the failed assertion error persists.
> >
> > > Any ideas?
> >
> > And this is just running volume_stats by itself?  ie: it was trying to
> > produce the -help output?
> >
> >
> > --
> > Andrew Janke
> > (a.janke at gmail.com || http://a.janke.googlepages.com/)
> > Canberra->Australia    +61 (402) 700 883
> > _______________________________________________
> > MINC-users at bic.mni.mcgill.ca
> > http://www.bic.mni.mcgill.ca/mailman/listinfo/minc-users
> >
> _______________________________________________
> MINC-users at bic.mni.mcgill.ca
> http://www.bic.mni.mcgill.ca/mailman/listinfo/minc-users


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