[MINC-users] Automatic way to flip brains?
Tom Tom
waveflux at gmail.com
Wed Apr 28 22:48:34 EDT 2010
thanks a lot Andrew!
i'll give it a try :)
Tom
On Wed, Apr 28, 2010 at 10:36 PM, Andrew Janke <a.janke at gmail.com> wrote:
> Hi Tom
>
> On Thu, Apr 29, 2010 at 12:32, Tom Tom <waveflux at gmail.com> wrote:
>> I have a few minc files that have brains that are upside down so i'm
>> wondering if there is an automated way to flip them 180 degrees?
>
> I have a dirty little perl script to do this:
>
> http://mavis.anu.edu.au/scripts/volflip
>
> Use it like this:
>
> $ volflip -z <in.mnc> <out.mnc>
>
> Be careful when doing things like this that you don't mess with any
> direction cosines in your volume. volflip will most certainly not do
> what you expect if you wish to retain this information.
>
>
> --
> Andrew Janke
> (a.janke at gmail.com || http://a.janke.googlepages.com/)
> Canberra->Australia +61 (402) 700 883
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