[MINC-users] failures when running N3 withsmallsmoothingdistances

[Vitali Zagorodnov]

Errr.. My Linux skills are quite rusty. How do I force installation to
use older gcc compiler?

Yes, I am installing from source. For built packages, I don't know how
to change default installation directory, which should be
/usr/local/freesurfer/mni

-----Original Message-----
From: minc-users-bounces at bic.mni.mcgill.ca
[mailto:minc-users-bounces at bic.mni.mcgill.ca] On Behalf Of Claude LEPAGE
Sent: Tuesday, May 05, 2009 12:04 AM
To: minc-users at bic.mni.mcgill.ca
Subject: Re: [MINC-users] failures when running N3
withsmallsmoothingdistances

Hi,

> Anyway, I tried installing latest ebtks (version 1.6.1) and N3
(1.10.1).
> The ebtks package installed fine, but I am getting error installing
N3:
>
> /usr/local/freesurfer/mni/lib/libEBTKS.a(Spline.o): In function
> `RSpline::addDataPoint(float const*, double)':
> /home/zvitali/Desktop/ebtks-1.6.1/src/Spline.cc:342: undefined
reference
> to `Mat<double>& operator+=<double, double>(Mat<double>&, Mat<double>
> const&)'

....

I'm assuming that you are installing these packages from source. Please
use gcc 4.1.X or older. Newer versions like 4.2 and above don't work.
Well, it's our C++ code that does not comply to the new standards for
instantiation of templates, the compiler itself is fine.

You can also get built packages here http://packages.bic.mni.mcgill.ca/.

Claude
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