[MINC-users] mnc2nii dumps core

Yoshitaka KUMAKURA kumakura at bic.mni.mcgill.ca
Thu Dec 4 01:13:05 EST 2008


Hi Cluade and Andrew,

Option (2) works!

I've learned that "-dimrange time=2,1" followed by mincaverage to remove
time dimension is redundant.

Thank you,
Yoshi



On Mon, 1 Dec 2008, Claude LEPAGE wrote:

> Hi Yoshi,
>
> I looked at your problem with mnc2nii with a colleague. I have two suggestions
> for you.
>
> 1 - update your minc tools and redo the operation "mincreshape -dimrange time=2,1"
>     to extract the time point with the latest minc, then do the conversion.
>
> 2 - still use the old version, but specify "mincreshape -dimrange time=2" (no
>     2,1). Then redo the conversion with mnc2nii.
>
> Option (2) might work but I'm not sure. Option (1) seems to work here for us.
> This was likely a bug in minc when copying the header. mnc2nii alone will not
> work if its input has been extracted with the old version of mincreshape.
>
> Please try this and let me know if it works.
>
> Yours,
>
> Claude
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> MINC-users at bic.mni.mcgill.ca
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