[MINC-users] mnc2nii dumps core

[Yoshitaka KUMAKURA]

Hello Claude,

Thanks a lot for your suggestions.

Since my collaborator in Tokyo has the mnc file that underwnet
"mincreshape -dimrange time=2,1", I will get it from him and try your suggestins. (I just have the mnc file that I
tested for mnc2nii and left in BIC's scratch space.) I will surely let you
know if it works.

Best regards,
Yoshi


On Mon, 1 Dec 2008, Claude LEPAGE wrote:

> Hi Yoshi,
>
> I looked at your problem with mnc2nii with a colleague. I have two suggestions
> for you.
>
> 1 - update your minc tools and redo the operation "mincreshape -dimrange time=2,1"
>     to extract the time point with the latest minc, then do the conversion.
>
> 2 - still use the old version, but specify "mincreshape -dimrange time=2" (no
>     2,1). Then redo the conversion with mnc2nii.
>
> Option (2) might work but I'm not sure. Option (1) seems to work here for us.
> This was likely a bug in minc when copying the header. mnc2nii alone will not
> work if its input has been extracted with the old version of mincreshape.
>
> Please try this and let me know if it works.
>
> Yours,
>
> Claude
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