[MINC-users] nii2mnc problem

Andrew Janke a.janke at gmail.com
Sun Apr 20 10:36:25 EDT 2008


>  I've run into what appears to be a problem with nii2mnc.  I've run a
>  few hundred ADNI volumes (nifti-1) through nii2mnc, and after
>  determining the proper -flip parameters, all seemed OK ... except,
>  that a few volumes, using the same input parameters, were flipped
>  along the inferior-superior axis (i.e., the brains were upside-down).
>  Now, the problem does not lie with the volume meta-data, as any number
>  of other nifti-1 viewers are able to display the volumes normally ...
>  only nii2mnc has problems.  I have a samples of both "good" and
>  "upside-down" volumes, if anyone wants to take a look.

Hi Jim,

Sounds "interesting".  Can you put these recalcitrant volumes up
somewhere that I can get at them?

Thanks


a


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