[MINC-users] mincconvert -2 error

[Audette, Michel]

Hi all, 

I'm trying to get mincconvert to work on mnc files, to produce mnc2, and I'm seeing the following: 

maudette at icaw164201:~/data/data/heartData/mincdata/01446397_mnc> mincconvert -2 heartMarkersClass0a_iso_distlt5.mnc heartMarkersClass0a_iso_distlt5.mnc2 -clob
HDF5-DIAG: Error detected in HDF5 library version: 1.6.1 thread 0.  Back trace follows.
  #000: H5F.c line 3191 in H5Fclose(): decrementing file ID failed
    major(07): Atom layer
    minor(16): Unable to close file
  #001: H5F.c line 3119 in H5F_close(): unable to flush cache
    major(08): Meta data cache layer
    minor(36): Unable to flush data from cache
  #002: H5F.c line 2881 in H5F_flush(): low level flush failed
    major(05): Low-level I/O layer
    minor(23): Write failed
  #003: H5FD.c line 3265 in H5FD_flush(): driver flush request failed
    major(22): Virtual File Layer
    minor(27): Unable to initialize object
  #004: H5FDsec2.c line 822 in H5FD_sec2_flush(): unable to extend file properly
    major(05): Low-level I/O layer
    minor(21): Seek failed

Has anyone seen this before? Is there a simple fix? 

Thanks for your kind attention. 

Cheers,

Michel

Michel Audette, Ph.D.
Innovation Center Computer Assisted Surgery (ICCAS)
Semmelweisstraße 14
Leipzig, Germany
Phone: ++49 (0) 341 / 97 - 1 20 13
Fax: ++49 (0) 341 / 97 - 1 20 09