[MINC-users] Problem Buliding MNI Models

[Penhune Lab]

sorry to resurrect such an old thread but im having the same problem
building the models in an intel mac, getting the same errors:

[2006-05-11 13:31:55] /usr/local/bin/mincresample -clobber
icbm_avg_152_t1_tal_lin.mnc icbm_avg_152_t1_tal_lin_pad.mnc -start
-106 -142 -88 -step 2 2 2 -nelements 107 125 107Transforming
slices:...........................................................................................................Done
(from miopen): Can't write compressed file
ncredef: ncid -1: Not a netCDF id
ncattput: ncid -1: Not a netCDF id
ncclose: ncid -1: Not a netCDF id


the only difference is im using minc 2.0.11 as opposed to .10

im sure someone must have solved this problem since this is a fairly
necessary installation; any ideas how to fix this?? Andrew mentioned
something about minc not handling compression correctly, can i disable
compression?? i will try to modify the source code and will post a patch if
i succeed

Thank you very much,

Alejandro Endo

On 6/4/06, Andrew Janke <a.janke at gmail.com> wrote:
>
> Hi again Gil,
>
> Sorry about the late reply with this, but I just realised that you
> were using MINC 2.0.10.  There are a few "issues" in that release with
> respect to compression. I woud still suggest that if you are using
> MINC in a runtime environment to stick with minc 1.x (1.4 at this
> stage).
>
> MINC 2.0 is progressing slowly towards stability but there are still a
> few lingering issues.
>
>
> a
>
> On 5/18/06, Gil Citro <citrog at gmail.com> wrote:
> > Actually no, I compiled MINC 2.0.10 myself from the source.  I also
> > compiled NetCDF 3.6.1 from source, because NetCDF 3.5.0 would not
> > compile on my system.  Any suggestions for how to make NetCDF find
> > gzip?  Thanks again.
> >
> > Gil
> >
> > On 5/17/06, Andrew Janke <a.janke at gmail.com> wrote:
> >
> > >
> > > Looks like netcdf cannot find the gzip runtime libraries (to
> > > uncompress the input file).  If this minc install came from a binary
> > > package this would be suprising as they are supposed to be compiled
> > > static.
> > >
> > > On 5/11/06, Gil Citro <citrog at gmail.com> wrote:
> > > > I'm having trouble building and installing
> > > >
> > > > mni-models_average305-lin-1.0
> > > > mni-models_colin27-lin-1.0
> > > > mni-models_icbm152-lin-1.0
> > > >
> >
> > _______________________________________________
> > MINC-users at bic.mni.mcgill.ca
> > http://www.bic.mni.mcgill.ca/mailman/listinfo/minc-users
> >
>
>
> --
> Andrew Janke   (a.janke at gmail.com || http://a.janke.googlepages.com/)
> Canada->Montreal                                   Cell: +1 (514) 924 2012
> _______________________________________________
> MINC-users at bic.mni.mcgill.ca
> http://www.bic.mni.mcgill.ca/mailman/listinfo/minc-users
>



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