[MINC-users] minc blur (mni_autoreg)

[Jason Lerch]

Did you compile minc2 with the ''--enable-minc2" command line option?  
By default minc2 does not compile the newer hdf5 support in (why this  
is the default I cannot fathom).

Jason

On 11-Sep-06, at 6:57 PM, Penhune Lab wrote:

> Hello everyone
> Im trying to install mni_autoreg but im getting a problem when i  
> try to
> compile mincblur:
>
> ...
> gradmag_volume.o: In function `build_vol_info':
> /home/vp/fMRI/mni_autoreg-0.99.2/mincblur/gradmag_volume.c:330:  
> undefined
> reference to `MI2varinq'
> /home/vp/fMRI/mni_autoreg-0.99.2/mincblur/gradmag_volume.c:335:  
> undefined
> reference to `MI2varinq'
> gradmag_volume.o: In function `make_curvature_volumes':
> /home/vp/fMRI/mni_autoreg-0.99.2/mincblur/gradmag_volume.c:1275:  
> undefined
> reference to `MI2attput'
> gradmag_volume.o: In function `make_gradmag_volumes':
> /home/vp/fMRI/mni_autoreg-0.99.2/mincblur/gradmag_volume.c:1127:  
> undefined
> reference to `MI2attput'
> collect2: ld returned 1 exit status
> make: *** [mincblur] Error 1
>
>
> all those undefined references are part of minc_compat.c but i cant  
> seem to
> tell the compiler to use the minc_compat.o file that i created when
> installing minc2
>
> any ideas? has anyone else encountered this??
>
> im using linux mandriva 2006
> kernel 2.6
>
> thank you very much for your time
>
> -- 
> Laboratory for Motor Learning and Neural Plasticity
> Dr. Virginia Penhune
> Department of Psychology, Concordia University
> SP-A 244, 7141 Sherbrooke St. W
> Montreal, QC  H4B 1R6  Canada
> (514)848-2424 ext. 7567
> http://psychology.concordia.ca/fac/penhune/winindex.html
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