[MINC-users] fmr_preprocess
Sheng Bao
forrest.bao at gmail.com
Mon Jun 26 03:09:08 EDT 2006
hi, guys, actually these days I am help Xingfeng Lee to install software he
needed to run his program.
I have downloaded the Getopt::Tabular from CPAN.
But I encountered the following problem when I did exactly as what the
instruction said
[root at ambrose Getopt-Tabular-0.3]# perl Makefile.PL
Config.pm <http://config.pm/> did not return a true value at
/usr/lib/perl5/5.8.6/ExtUtils/MakeMaker.pm line 9.
BEGIN failed--compilation aborted at
/usr/lib/perl5/5.8.6/ExtUtils/MakeMaker.pm line 9.
Compilation failed in require at Makefile.PL line 1.
BEGIN failed--compilation aborted at Makefile.PL line 1.
Coz Dr.Li came to Nanjing Jingling Hospital to cooperate a research with a
friend of mine, I installed the Fedora Core 4 system, the Matlab and other
tools(such as display, regiser, minc, etc.). Here in China, only quite a few
people know how to use Linux operating system and I have never used Perl
programming language before. Before I help Dr.Li, my friend has asked many
other people to prepare the workstation. But they failed. So I was involved
in this issue just these days. I do need some intructions to help Dr. Li
finish his experiment.
Cheers,
Sheng
On 6/26/06, Andrew Janke <a.janke at gmail.com> wrote:
>
> Li,
>
> You will have to download and install Getopt::Tabular from www.cpan.org
>
>
> a
>
> On 6/25/06, xingfeng lee <spmlxf at yahoo.com> wrote:
> > Hi Andrew,
> > Thank you very much, the new problem is:
> >
> > [root at ambrose Test]# fmr_preprocess
> > Can't locate Getopt/Tabular.pm in @INC (@INC contains:
> /usr/lib/perl5/site_perl/5.8.6/i386-linux-thread-multi
> /usr/lib/perl5/site_perl/5.8.5/i386-linux-thread-multi
> /usr/lib/perl5/site_perl/5.8.4/i386-linux-thread-multi
> /usr/lib/perl5/site_perl/5.8.3/i386-linux-thread-multi
> /usr/lib/perl5/site_perl/5.8.6 /usr/lib/perl5/site_perl/5.8.5
> /usr/lib/perl5/site_perl/5.8.4 /usr/lib/perl5/site_perl/5.8.3
> /usr/lib/perl5/site_perl
> /usr/lib/perl5/vendor_perl/5.8.6/i386-linux-thread-multi
> /usr/lib/perl5/vendor_perl/5.8.5/i386-linux-thread-multi
> /usr/lib/perl5/vendor_perl/5.8.4/i386-linux-thread-multi
> /usr/lib/perl5/vendor_perl/5.8.3/i386-linux-thread-multi
> /usr/lib/perl5/vendor_perl/5.8.6 /usr/lib/perl5/vendor_perl/5.8.5
> /usr/lib/perl5/vendor_perl/5.8.4 /usr/lib/perl5/vendor_perl/5.8.3
> /usr/lib/perl5/vendor_perl /usr/lib/perl5/5.8.6/i386-linux-thread-multi
> /usr/lib/perl5/5.8.6 .) at /bin/fmr_preprocess line 40.
> > BEGIN failed--compilation aborted at /bin/fmr_preprocess line 40.
> >
> >
> > All the best,
> > Li
> >
> >
> >
> > Andrew Janke <a.janke at gmail.com > wrote: Hi Li,
> >
> > I suspect you will have to set the execute bit for the file. ie:
> >
> > $ chmod +x fmr_preprocess
> >
> >
> > a
> >
> > On 6/23/06, xingfeng lee wrote:
> > > Dear MINC experts:
> > >
> > > Could you help?
> > > I came cross a problem when i did fmri data realignment. I copied the
> function : fmr_preprocess from my computer at McGill to the bin directory of
> my computer in China, but it did not work. I remember that this function
> does not need to install, just copy this function to the bin directory. The
> error message was:
> > > [root at ambrose qiu_yan_li_20060611_130900]# fmr_preprocess
> qiu_yan_li_20060611_130900_3_mri.mnc
> > > bash: /bin/fmr_preprocess: Permission denied
> > > Could you give some advises?
> > >
> > > If it need install, where should i download it, and how to install
> it?
> > >
> > > Thank you very much and have a nice weekend.
> > > all the best,
> > > Li
> > >
> > >
> > > ---------------------------------
> > > Ring'em or ping'em. Make PC-to-phone calls as low as 1¢/min with
> Yahoo! Messenger with Voice.
> > > _______________________________________________
> > > MINC-users at bic.mni.mcgill.ca
> > > http://www.bic.mni.mcgill.ca/mailman/listinfo/minc-users
> > >
> >
> >
> > --
> > Andrew Janke (a.janke at gmail.com || http://a.janke.googlepages.com/)
> > Canada->Montreal Cell: +1 (514) 924
> 2012
> >
> > _______________________________________________
> > MINC-users at bic.mni.mcgill.ca
> > http://www.bic.mni.mcgill.ca/mailman/listinfo/minc-users
> >
> >
> >
> > Andrew Janke <a.janke at gmail.com> wrote: Hi Li,
> >
> > I suspect you will have to set the execute bit for the file. ie:
> >
> > $ chmod +x fmr_preprocess
> >
> >
> > a
> >
> > On 6/23/06, xingfeng lee wrote:
> > > Dear MINC experts:
> > >
> > > Could you help?
> > > I came cross a problem when i did fmri data realignment. I copied the
> function : fmr_preprocess from my computer at McGill to the bin directory of
> my computer in China, but it did not work. I remember that this function
> does not need to install, just copy this function to the bin directory. The
> error message was:
> > > [root at ambrose qiu_yan_li_20060611_130900]# fmr_preprocess
> qiu_yan_li_20060611_130900_3_mri.mnc
> > > bash: /bin/fmr_preprocess: Permission denied
> > > Could you give some advises?
> > >
> > > If it need install, where should i download it, and how to install
> it?
> > >
> > > Thank you very much and have a nice weekend.
> > > all the best,
> > > Li
> > >
> > >
> > > ---------------------------------
> > > Ring'em or ping'em. Make PC-to-phone calls as low as 1¢/min with
> Yahoo! Messenger with Voice.
> > > _______________________________________________
> > > MINC-users at bic.mni.mcgill.ca
> > > http://www.bic.mni.mcgill.ca/mailman/listinfo/minc-users
> > >
> >
> >
> > --
> > Andrew Janke (a.janke at gmail.com || http://a.janke.googlepages.com/)
> > Canada->Montreal Cell: +1 (514) 924
> 2012
> >
> > _______________________________________________
> > MINC-users at bic.mni.mcgill.ca
> > http://www.bic.mni.mcgill.ca/mailman/listinfo/minc-users
> >
> >
> >
> > ---------------------------------
> > Sneak preview the all-new Yahoo.com. It's not radically different. Just
> radically better.
> > _______________________________________________
> > MINC-users at bic.mni.mcgill.ca
> > http://www.bic.mni.mcgill.ca/mailman/listinfo/minc-users
> >
>
>
> --
> Andrew Janke (a.janke at gmail.com || http://a.janke.googlepages.com/)
> Canada->Montreal Cell: +1 (514) 924 2012
>
>
> _______________________________________________
> MINC-users at bic.mni.mcgill.ca
> http://www.bic.mni.mcgill.ca/mailman/listinfo/minc-users
>
--
EE is no more about circuits than CS is about computers.
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