[MINC-users] Minc tools and scripts for cygwin

[Daniel Schwarz]

Hi,

I have a problem with mnc2ana on cygwin - the link mnc2ana.lnk does not work
there. Any ideas how to make it work?
Thanks.

Daniel Schwarz

-----Original Message-----
From: minc-users-bounces at bic.mni.mcgill.ca
[mailto:minc-users-bounces at bic.mni.mcgill.ca] On Behalf Of Dylan David
Wagner
Sent: Tuesday, October 25, 2005 2:48 AM
To: MINC users mailing list
Subject: [MINC-users] Minc tools and scripts for cygwin



Hey Minc Users,

      To the few people out there who use it, I added a bunch of new
packages and scripts to the el cheapo cygwin build I have at:
http://www.bic.mni.mcgill.ca/~dwagne/dwagne.html

      Namely: N3, cortical surface, classify and glim image, plus the
smooth_mask perl script. In other words, everything you need to do the VBM
tutorial on the wiki. So far it seems to work good and you can call it from
matlab (pc). You can probably install the packages yourself, but some of
them required fixing before they work (I'm looking at you
classify!) or simply aren't available on packages.bic (ie:cortical_surface).

      You'll probably want the colin 27, icbm 152 and average 305 models at
packages.bic.mni.mcgill.ca, it wasn't worth including them. They're easy to
install, just follow the instructions in the readme.txt

       Also, don't forget, to run display in cgywin you still need to
startx.

              Best,
                  DDW
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