[MINC-users] icbm probabilistic atlas

Daniel Schwarz minc-users@bic.mni.mcgill.ca
Mon Jun 6 08:03:05 2005


Dear minc-users,

I need to get

icbm452_atlas_probability_white.hdr,
icbm452_atlas_probability_gray.hdr and
icbm452_atlas_probability_csf.hdr

aligned with

icbm_avg_152_t1_tal_lin.mnc

I used ana2mnc to get the atlases into mnc format. Is there a simple way 
how to crop/pad the images to get them aligned with icbm_avg_152....?

file: /usr/local/mni/lib/model/icbm_avg_152_t1_tal_lin.mnc
image: signed__ short 0 to 4095
image dimensions: zspace yspace xspace
    dimension name         length         step        start
    --------------         ------         ----        -----
    zspace                    181            1          -72
    yspace                    217            1         -126
    xspace                    181            1          -90

   
file: gray.mnc
image: signed__ short 0 to 32767
image dimensions: zspace yspace xspace
    dimension name         length         step        start
    --------------         ------         ----        -----
    zspace                    148            1          -74
    yspace                    188            1          -94
    xspace                    149           -1         74.5


Thank you in advance for your replies.

Daniel Schwarz