[MINC-users] regions of interest

minc-users at bic.mni.mcgill.ca minc-users@bic.mni.mcgill.ca
Fri Aug 12 18:10:52 EDT 2005


G'day. This is my first post to this list. My name is Stephen Hartley, I'm
an undergrad working at USUHS and NIH (National Institute of Aging, Lab of
Epidemiology, Demography, and Biometry). I've been working with Alex
Zijdenbos for the last month or two. Right now, however, he's on vacation.
I was wondering if you guys could help me out.

I'm comparing two sets of images (paired, two from each subject). I would
like to be able to limit the comparison to specific brain regions. They're
all registered to the taliarch space.

Ideally, I'd want a set taliarch space masks of the brain regions (for
example, one made with the average 305 brain). With that, I could just
tell mincstats to only count the voxels within the mask region. Do you
know where i could get such masks?

However, I imagine there are other ways to acheive the same goal. And
ideas spring to mind?

I'm intentionally leaving the definition of "region" vague. I don't much
care where it draws the line, just that it's a relevant line somewhere.

Stephen Hartley



More information about the MINC-users mailing list