****RejectedAttachment**** Re: [MINC-users] EBTKS not found when configuring N3
Asim Khan
minc-users@bic.mni.mcgill.ca
Tue, 27 Jan 2004 12:33:33 +0000
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Steve,
Thanks for your suggestion but I'm completely dumbfounded as to why it
doesn't work.
[root@eclipse N3-1.07]#> ./configure --prefix=/opt/N3/mni
--with-build-path=/usr/local CXX=CC CC=c89 F90=f90 F77=f77 make=maketool
checking for a BSD-compatible install... ac_config_aux/install-sh -c
checking whether build environment is sane... yes
checking for gawk... no
checking for mawk... no
checking for nawk... nawk
checking whether make sets $(MAKE)... yes
checking for a BSD-compatible install... ac_config_aux/install-sh -c
checking whether ln -s works... yes
checking whether make sets $(MAKE)... (cached) yes
checking for style of include used by make... GNU
checking for gcc... c89
checking for C compiler default output file name... a.out
checking whether the C compiler works... yes
checking whether we are cross compiling... no
checking for suffix of executables...
checking for suffix of object files... o
checking whether we are using the GNU C compiler... no
checking whether c89 accepts -g... yes
checking for c89 option to accept ANSI C... none needed
checking dependency style of c89... none
checking whether c89 and cc understand -c and -o together... yes
checking whether we are using the GNU C++ compiler... no
checking whether CC accepts -g... yes
checking dependency style of CC... none
checking for ranlib... ranlib
checking build system type... sparc-sun-solaris2.8
checking host system type... sparc-sun-solaris2.8
checking for library m... yes
checking whether we are using the GNU Fortran 77 compiler... no
checking whether f77 accepts -g... yes
checking how to get verbose linking output from f77... -v
checking for Fortran libraries of f77... -L/usr/local/lib
-R/opt/SUNWspro/lib -L/opt/SUNWspro/lib -L/opt/SUNWspro/SC5.0/lib
-L/usr/ccs/lib -L/usr/lib -lm -lF77 -lM77 -lsunmath -lcx
checking for dummy main to link with Fortran libraries... none
checking for Fortran name-mangling scheme... lower case, underscore, no
extra underscore
checking for sgemm_... no
checking for ATL_xerbla in -latlas... no
checking for sgemm_ in -framework vecLib... no
checking for sgemm_ in -lblas... no
checking for sgemm_ in -lcxml... no
checking for sgemm_ in -ldxml... no
checking for acosp in -lsunmath... yes
checking for sgemm_ in -lsunperf... yes
checking for cheev_... yes
checking for library EBTKS... no
configure: error: cannot find required library EBTKS
Please find attached the config.log.tar and the enviroment and path to
libraries is shown below:
[root@eclipse N3-1.07]#> env
PWD=/opt/N3/N3-1.07
TZ=GB
HZ=100
HOSTNAME=eclipse
LD_LIBRARY_PATH=/usr/local/lib:/usr/local/include:/opt/SUNWspro/lib:/opt/SUNWspro/include
MANPATH=:/usr/local/man:/usr/share/man
MACHTYPE=sparc-sun-solaris
OLDPWD=/opt/N3
LOGNAME=root
SHLVL=1
SHELL=/sbin/sh
HOSTTYPE=sparc
OSTYPE=solaris
HOME=/
TERM=vt100
PATH=/usr/bin:/bin:/usr/sbin:/usr/local:/usr/local/bin:/usr/ccs/bin:/usr/dt/bin:/usr/openwin/bin:/usr/bin/nsr:/usr/ucb:/opt/SUNWspro/bin/
_=/usr/bin/env
[root@eclipse N3-1.07]#> ls -l /usr/local/lib/libE*
-rw-r--r-- 1 bin bin 9600780 Jan 22 14:44
/usr/local/lib/libEBTKS.a
-rwxr-xr-x 1 bin bin 1056 Jan 22 14:44
/usr/local/lib/libEBTKS.la
ls -l /usr/local/include/EBTKS/
total 488
-rw-r--r-- 1 bin bin 7562 Jan 22 14:44 Array.h
-rw-r--r-- 1 bin bin 9781 Jan 22 14:44 CachedArray.h
-rw-r--r-- 1 bin bin 1935 Jan 22 14:44 Complex.h
-rw-r--r-- 1 bin bin 4640 Jan 22 14:44 Dictionary.h
-rw-r--r-- 1 bin bin 3627 Jan 22 14:44 FileIO.h
-rw-r--r-- 1 bin bin 4313 Jan 22 14:44 Histogram.h
-rw-r--r-- 1 bin bin 7698 Jan 22 14:44 MPoint.h
-rw-r--r-- 1 bin bin 6426 Jan 22 14:44 MString.h
-rw-r--r-- 1 bin bin 2640 Jan 22 14:44 MTypes.h
-rw-r--r-- 1 bin bin 50789 Jan 22 14:44 Matrix.h
-rw-r--r-- 1 bin bin 30004 Jan 22 14:44 Matrix3D.h
-rw-r--r-- 1 bin bin 8790 Jan 22 14:44 MatrixSupport.h
-rw-r--r-- 1 bin bin 4444 Jan 22 14:44 MatrixTest.h
-rw-r--r-- 1 bin bin 1528 Jan 22 14:44 Minc.h
-rw-r--r-- 1 bin bin 2835 Jan 22 14:44 OpTimer.h
-rw-r--r-- 1 bin bin 6705 Jan 22 14:44 OrderedCltn.h
-rw-r--r-- 1 bin bin 2962 Jan 22 14:44 Path.h
-rw-r--r-- 1 bin bin 4411 Jan 22 14:44 Polynomial.h
-rw-r--r-- 1 bin bin 2147 Jan 22 14:44 Pool.h
-rw-r--r-- 1 bin bin 14634 Jan 22 14:44 SimpleArray.h
-rw-r--r-- 1 bin bin 7215 Jan 22 14:44 Spline.h
-rw-r--r-- 1 bin bin 1515 Jan 22 14:44 Stack.h
-rw-r--r-- 1 bin bin 9668 Jan 22 14:44 TBSpline.h
-rw-r--r-- 1 bin bin 3816 Jan 22 14:44 TrainingSet.h
-rw-r--r-- 1 bin bin 5644 Jan 22 14:44 ValueMap.h
-rw-r--r-- 1 bin bin 3001 Jan 22 14:44 amoeba.h
-rw-r--r-- 1 bin bin 1444 Jan 22 14:44 assert.h
-rw-r--r-- 1 bin bin 4613 Jan 22 14:44 backProp.h
-rw-r--r-- 1 bin bin 1437 Jan 22 14:44 dcomplex.h
-rw-r--r-- 1 bin bin 4843 Jan 22 14:44 fcomplex.h
-rw-r--r-- 1 bin bin 3064 Jan 22 14:44 matlabSupport.h
-rw-r--r-- 1 bin bin 4419 Jan 22 14:44 miscTemplateFunc.h
-rw-r--r-- 1 bin bin 2037 Jan 22 14:44 popen.h
-rw-r--r-- 1 bin bin 2399 Jan 22 14:44 trivials.h
Steve ROBBINS wrote:
> On Thu, Jan 22, 2004 at 10:23:13AM -0500, Jason Lerch wrote:
>
>>You never specify where the library should be found. Try this instead
>>
>>./configure --prefix=/opt/N3/mni
>>--with-build-path=/path/to/libraries:/path/to/other/libs
>
>
>
> To be precise, use
>
> --with-build-path=/usr/local
>
> since you installed EBTKS into /usr/local/{lib,include} according
> to one of your previous mails. As a bonus: if you do this, you no longer
> need to set CPPFLAGS for configure.
>
>
>
>>or set the LDFLAGS environment along with the ones that you have set
>>below.
>
>
> Err, but this ought to have worked:
>
>
>>>[root@eclipse N3-1.07]#> ./configure --prefix=/opt/N3/mni
>>>CC=/opt/SUNWspro/bin/c89 FFLAGS="-O -w" CXXFLAGS=-O
>>>CPPFLAGS="-I/usr/local/include" CXX=/opt/SUNWspro/bin/CC
>>>F90=/opt/SUNWspro/bin/f90 F77=/opt/SUNWspro/bin/f77
>>>make=/opt/SUNWspro/bin/maketool LDFLAGS="-L/usr/local/lib"
>>
>
> You need to check config.log. If it doesn't point you to the cause,
> send that file to me off-list.
>
> -S
>
> _______________________________________________
> MINC-users@bic.mni.mcgill.ca
> http://www.bic.mni.mcgill.ca/mailman/listinfo/minc-users
>
--
------------------------------------
Asim Khan
Unix Systems Administrator
St George's Hospital Medical School
www.sghms.ac.uk
------------------------------------
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