[MINC-users] minctoraw

[Andrew Janke]

On Thu, 5 Sep 2002, John Sled wrote:

> Another option you might consider is to use mincreshape to normalize
> the slices as follows
>
> volume_stats -min -max brain.mnc
>
> File:         brain.mnc
> # voxels:     902629
> % of total:   100
> Volume (mm3): 7.22103e+06
> Min:          0
> Max:          1.32407e+06

Good point.. :)  I'd forgotten about this method.

For those who are wondering where volume_stats comes from, it's part of John
Sleds N3 package.  The volume_stats program has now been incorporated into MINC
itself but is called mincstats..

mincstats brain.mnc will give you the same output.

Then the folling is all the same..

> mincreshape -image_range 0 1.32407e06 brain.mnc brain_norm.mnc
>
> File:         brain_norm.mnc
> # voxels:     902629
> % of total:   100
> Volume (mm3): 7.22103e+06
> Min:          0
> Max:          1.32407e+06



andrew