[MINC-development] MINC with NetCDF 4.4?

[Vladimir S. FONOV]

Hello,

minc-toolkit is actually using NetCDF 4.3.x for  a while , and all the tests pass. See https://github.com/BIC-MNI/minc-toolkit/blob/master/cmake-modules/BuildNETCDF.cmake 
the libminc is used from develop branch of https://github.com/BIC-MNI/libminc though. 


On Aug 23, 2015, at 8:21 AM, Robert D. Vincent <robert.d.vincent at mcgill.ca> wrote:

> Hi Steve,
> 
> Yes, we are mostly building directly off the github tree these days. I have not tried building with NetCDF > 4.X. As you probably know, it's surprising to see these particular test failures, as the general transform code should not contain many code paths that rely on NetCDF.
> 
> How did you add 4.4 to the build - i.e. what is the URL of the NetCDF tarball you are using?
> 
> Which project are you building - libminc, minc-tools, or minc-toolkit (the all-encompassing meta-project)?
> 
>     -bert
> 
> On Sat, Aug 22, 2015 at 11:20 PM, Steve M. Robbins <steve at sumost.ca> wrote:
> Hi,
> 
> Debian just upgraded NetCDF to version 4.4.0, which broke the MINC build.
> Debian was using MINC 2.2.00, so I spent some time today updating MINC.
> 
> I can't find any release tarballs more recent than 2.2.00 (from 2012!).  So I
> presume everyone is working from github tree?  I updated to the tip of the
> 'master' branch and discovered that if compiled with MINC1 support, some tests
> fail.  They fail also in develop:
> 
> The following tests FAILED:
>          25 - test_xfm_3 (Failed)
>          26 - copy_xfm (Failed)
>          27 - verify_xfm_1 (Failed)
>          28 - verify_xfm_float (Failed)
>          29 - verify_xfm_short (Failed)
>          30 - verify_xfm_byte (Failed)
>          31 - verify_xfm_2 (Failed)
> 
> 
> Anyone have experience with NetCDF 4.4?
> 
> Thanks,
> -Steve
> 
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Best regards, Vladimir S. FONOV ~ v.s.fonov <at> ilmarin.info




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