[MINC-development] mincresample issue/bug at smaller voxel sizes using concatenated transforms

[Andrew Janke]

Nope, you're not missing anything. It would require an API change (or
adding a copy of the same function with _ftol(... or something added
to the end). I am just very adverse to making the result of a MINC
analysis dependent on an environment variable.

It's just too hidden.  What would be the plan for distributing scripts
that work on mouse data?  A line in a script that first sets/overrides
an ENV variable?  ack.


a

On 6 January 2011 23:14, Jason Lerch <jason at phenogenomics.ca> wrote:
> But that would require an API change, wouldn't it? Unless the command line switch to mincresample changes that environment variable ... Or am I missing something too obvious due to lack of coffee?
>
> Jason
>
> On 2011-01-06, at 12:37 AM, Andrew Janke <a.janke at gmail.com> wrote:
>
>> Perhaps it's time for YACLA for mincresample?
>>
>> I like this approach more than an environment variable as it will
>> preserve operation when scripts are passed around.
>>
>>
>> YACLA - Yet Another Command Line Argument
>>
>> --
>> Andrew Janke
>> (a.janke at gmail.com || http://a.janke.googlepages.com/)
>> Canberra->Australia    +61 (402) 700 883
>>
>>
>>
>>
>> On 24 December 2010 02:48, Matthijs van Eede <matthijs at phenogenomics.ca> wrote:
>>> Initially I thought the current solution in minc 2.1 would work for use, but
>>> we quite frequently use transformation grids with resolutions that are a lot
>>> coarser than the volumes we transform with them, so we would still run into
>>> the same problem. Is it possible to have an environment variable that can
>>> override the value that is set for ftol?
>> _______________________________________________
>> MINC-development mailing list
>> MINC-development at bic.mni.mcgill.ca
>> http://www.bic.mni.mcgill.ca/mailman/listinfo/minc-development
> _______________________________________________
> MINC-development mailing list
> MINC-development at bic.mni.mcgill.ca
> http://www.bic.mni.mcgill.ca/mailman/listinfo/minc-development
>