[MINC-development] postf problem on grumio [Fwd: RE: help with making pictures of activation]

[Sylvain Milot]

On Wed, 9 Dec 2009, Andrew Janke wrote:

> Grumio?

or login ...

> Is this local execution or remote?  I certainly have seen a lot of old
> BIC GLUT code do strange things and die when you attempt to run it
> remotely.  I would first be looking at the versions of GLUT (well
> freeglut) on both machines.

both remote and local - although the local system I tested on is lenny 64 bit.

it would seem postf works ok locally on 32-bit systems.

S

>
>
> a
>
> On Wed, Dec 9, 2009 at 08:15, Sylvain Milot <sylvain at bic.mni.mcgill.ca> wrote:
>>
>> Hi Mike,
>>
>> I tested on 3 systems so far and it segfaults on all 3 - and for both
>> /usr/local/bic/bin/postf and /usr/local/mni/bin/postf. I also tried with different
>> data.
>>
>> I have CC'ed minc-development but I don't know if this software is actually supported.
>>
>> S
>>
>> On Tue, 8 Dec 2009, Michael Ferreira wrote:
>>
>>> Hello again admins,
>>>
>>> I just verified this problem w/ postf myself.  Basically trying to open any
>>> Minc image w/ postf on grumio results in a Seg Fault:
>>>
>>> grumio: /data/scratch/scratch1/mferre % postf test2.mnc
>>> Getting image information ... done
>>> Reading minc data ...................................... done
>>> Segmentation fault
>>>
>>> It works fine on our Linux workstations.
>>>
>>> mike
>>>
>>>
>>>
>>> -------- Original Message --------
>>> Subject: RE: help with making pictures of activation
>>> Date: Sun, 6 Dec 2009 16:32:52 -0500
>>> From: Lana Depatie <lana.depatie at mail.mcgill.ca>
>>> To: Michael Ferreira <mferre at bic.mni.mcgill.ca>
>>>
>>> Hi Mike,
>>>
>>> I tried to log in the bic (i.e., login.bic.mni.mcgill.ca) and to type the
>>> following command in the directory where my file was (cd
>>> /data/szrisk/szrisk2/lana/icbm_june/anal/as-vgs/adhd-i: "postf
>>> adhd-i_as-vgs_t.mnc".
>>>
>>> I get the following messages:
>>> "Getting image information .... done"
>>> "Reading minc data ...done"
>>> "Segmentation fault"
>>> and then I get back to the prompt.
>>>
>>> Do you know what the problem is?
>>> Thanks
>>>
>>
>> ---
>> Sylvain Milot (sylvain at bic.mni.mcgill.ca)
>>               (bicadmin at bic.mni.mcgill.ca)
>> Brain Imaging Centre
>> Montreal Neurological Institute
>> 3801 University Street
>> Webster 2B, Room 206
>> Montreal, Qc., Canada, H3A 2B4
>> Phone  : (514) 398-4965, Fax: 398-8948
>> Mobile : (514) 712-1768
>> Office : 527 Av Des Pins O., Room 104
>>          Montreal, Qc., H2W 1S4
>> _______________________________________________
>> MINC-development mailing list
>> MINC-development at bic.mni.mcgill.ca
>> http://www2.bic.mni.mcgill.ca/mailman/listinfo/minc-development
>>
>
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>

---
Sylvain Milot (sylvain at bic.mni.mcgill.ca)
               (bicadmin at bic.mni.mcgill.ca)
Brain Imaging Centre
Montreal Neurological Institute
3801 University Street
Webster 2B, Room 206
Montreal, Qc., Canada, H3A 2B4
Phone  : (514) 398-4965, Fax: 398-8948
Mobile : (514) 712-1768
Office : 527 Av Des Pins O., Room 104
          Montreal, Qc., H2W 1S4