[MINC-development] postf problem on grumio [Fwd: RE: help with making pictures of activation]

Andrew Janke a.janke at gmail.com
Tue Dec 8 16:27:57 EST 2009


Grumio?

Is this local execution or remote?  I certainly have seen a lot of old
BIC GLUT code do strange things and die when you attempt to run it
remotely.  I would first be looking at the versions of GLUT (well
freeglut) on both machines.


a

On Wed, Dec 9, 2009 at 08:15, Sylvain Milot <sylvain at bic.mni.mcgill.ca> wrote:
>
> Hi Mike,
>
> I tested on 3 systems so far and it segfaults on all 3 - and for both
> /usr/local/bic/bin/postf and /usr/local/mni/bin/postf. I also tried with different
> data.
>
> I have CC'ed minc-development but I don't know if this software is actually supported.
>
> S
>
> On Tue, 8 Dec 2009, Michael Ferreira wrote:
>
>> Hello again admins,
>>
>> I just verified this problem w/ postf myself.  Basically trying to open any
>> Minc image w/ postf on grumio results in a Seg Fault:
>>
>> grumio: /data/scratch/scratch1/mferre % postf test2.mnc
>> Getting image information ... done
>> Reading minc data ...................................... done
>> Segmentation fault
>>
>> It works fine on our Linux workstations.
>>
>> mike
>>
>>
>>
>> -------- Original Message --------
>> Subject: RE: help with making pictures of activation
>> Date: Sun, 6 Dec 2009 16:32:52 -0500
>> From: Lana Depatie <lana.depatie at mail.mcgill.ca>
>> To: Michael Ferreira <mferre at bic.mni.mcgill.ca>
>>
>> Hi Mike,
>>
>> I tried to log in the bic (i.e., login.bic.mni.mcgill.ca) and to type the
>> following command in the directory where my file was (cd
>> /data/szrisk/szrisk2/lana/icbm_june/anal/as-vgs/adhd-i: "postf
>> adhd-i_as-vgs_t.mnc".
>>
>> I get the following messages:
>> "Getting image information .... done"
>> "Reading minc data ...done"
>> "Segmentation fault"
>> and then I get back to the prompt.
>>
>> Do you know what the problem is?
>> Thanks
>>
>
> ---
> Sylvain Milot (sylvain at bic.mni.mcgill.ca)
>               (bicadmin at bic.mni.mcgill.ca)
> Brain Imaging Centre
> Montreal Neurological Institute
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> Webster 2B, Room 206
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