[MINC-development] minc-patch: fixing check for gunzip

[Vicka Corey]

i'm actually delighted to be testing :)  feel free to send me any new
binaries as they get built, or let me know when the new dist is ready...

thanks,
--vicka

On Mon, Nov 24, 2003 at 05:19:55PM -0500, Jason Lerch wrote:
> Or give me another few days and I'll have the updated binary dist which  
> fixes this and some of the other problems pointed out. Sorry about all  
> these problems, and thanks for the (perhaps unwilling) beta testing!
> 
> Jason
> 
> On Nov 24, 2003, at 5:15 PM, Steve ROBBINS wrote:
> 
> > On Mon, Nov 24, 2003 at 04:18:59PM -0500, Vicka Corey wrote:
> >> ...and having gotten past that, we bring you the next in error  
> >> messages:
> >>
> >> nu_correct -clobber nu/nu0.mnc nu/nu1.mnc
> >> [vicka@ocelot.nmr.mgh.harvard.edu:/private/space/birn/2/users/vicka/ 
> >> subjects/bert/mri/] [2003-11-24 16:16:04] running:
> >>   /usr/local/mni/bin/nu_estimate_np_and_em -parzen -log -sharpen 0.15  
> >> 0.01 -iterations 50 -stop 0.001 -shrink 4 -auto_mask -nonotify  
> >> -b_spline 1 -distance 200 -quiet -execute -clobber -nokeeptmp -tmpdir  
> >> /var/tmp/nu_correct_2481/ nu/nu0.mnc nu/nu1.imp
> >>
> >> expected floating-point argument for "-const" but got"DEBUG: state of  
> >> _s: 0
> >> DEBUG: state of _s: 0
> >> DEBUG: state of path: /tmp/test
> >> DEBUG: state of _s: 0
> >> 0"
> >
> > This is a goof on our part.  Apply the following diff to EBTKS,  
> > rebuild and install it,
> > then rebuild N3.
> >
> > -Steve
> >
> > Index: ChangeLog
> > ===================================================================
> > RCS file: /software/source/libraries/EBTKS/ChangeLog,v
> > retrieving revision 1.4
> > retrieving revision 1.5
> > diff -u -b -B -r1.4 -r1.5
> > --- ChangeLog	17 Nov 2003 04:07:51 -0000	1.4
> > +++ ChangeLog	21 Nov 2003 20:38:44 -0000	1.5
> > @@ -1,3 +1,8 @@
> > +2003-11-21  Steve ROBBINS  <stever@bic.mni.mcgill.ca>
> > +
> > +	* templates/CachedArray.cc: Remove debugging statements
> > +	erroneously left in code.
> > +
> >  2003-11-14  Steve ROBBINS  <stever@bic.mni.mcgill.ca>
> >
> >  	* configure.ac: Set version to 1.0.
> > Index: templates/CachedArray.cc
> > ===================================================================
> > RCS file: /software/source/libraries/EBTKS/templates/CachedArray.cc,v
> > retrieving revision 1.5
> > retrieving revision 1.6
> > diff -u -b -B -r1.5 -r1.6
> > --- templates/CachedArray.cc	17 Nov 2003 04:07:52 -0000	1.5
> > +++ templates/CachedArray.cc	21 Nov 2003 20:38:44 -0000	1.6
> > @@ -12,9 +12,9 @@
> >                express or implied warranty.
> >   
> > ----------------------------------------------------------------------- 
> > -----
> >  $RCSfile: CachedArray.cc,v $
> > -$Revision: 1.5 $
> > +$Revision: 1.6 $
> >  $Author: stever $
> > -$Date: 2003/11/17 04:07:52 $
> > +$Date: 2003/11/21 20:38:44 $
> >  $State: Exp $
> >   
> > ----------------------------------------------------------------------- 
> > ---*/
> >  #include <config.h>
> > @@ -478,9 +480,6 @@
> >  {
> >    assert(_size);
> >
> > -  cout << "DEBUG: in median of CachedArray" << endl;
> > -  cout << "DEBUG: _size = " << _size << endl;
> > -
> >    if (_size <= _blockSize) {
> >      if (!_blocks[0])
> >        _read(0);
> > @@ -503,7 +502,6 @@
> >        _read(0);
> >      return (*_blocks[0])(_size).medianVolatile();
> >    }
> > -  cout << "DEBUG: histMedian = " << _histMedian() << endl;
> >    return _histMedian();
> >  }
> >
> > @@ -723,7 +721,6 @@
> >  void
> >  CachedArray<Type>::_openStream()
> >  {
> > -  cout << "DEBUG: state of _s: " << _s.is_open() << endl;
> >    if (_s.is_open())
> >      _self->_s.close();
> >
> > @@ -734,10 +731,7 @@
> >      _s.open(path, ios::in|ios::out);
> >      //    _s.open(path, ios::in);
> >
> > -    cout << "DEBUG: state of path: " << path << endl;
> >      unlink(path);
> > -
> > -    cout << "DEBUG: state of _s: " << _s.is_open() << endl;
> >      //assert(_s.is_open());
> >
> >      // Create file at requested size
> >
> >
> > _______________________________________________
> > MINC-development mailing list
> > MINC-development@bic.mni.mcgill.ca
> > http://www.bic.mni.mcgill.ca/mailman/listinfo/minc-development
> 
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