[MINC-development] minc-patch: fixing check for gunzip

[Jason Lerch]

Or give me another few days and I'll have the updated binary dist which  
fixes this and some of the other problems pointed out. Sorry about all  
these problems, and thanks for the (perhaps unwilling) beta testing!

Jason

On Nov 24, 2003, at 5:15 PM, Steve ROBBINS wrote:

> On Mon, Nov 24, 2003 at 04:18:59PM -0500, Vicka Corey wrote:
>> ...and having gotten past that, we bring you the next in error  
>> messages:
>>
>> nu_correct -clobber nu/nu0.mnc nu/nu1.mnc
>> [vicka@ocelot.nmr.mgh.harvard.edu:/private/space/birn/2/users/vicka/ 
>> subjects/bert/mri/] [2003-11-24 16:16:04] running:
>>   /usr/local/mni/bin/nu_estimate_np_and_em -parzen -log -sharpen 0.15  
>> 0.01 -iterations 50 -stop 0.001 -shrink 4 -auto_mask -nonotify  
>> -b_spline 1 -distance 200 -quiet -execute -clobber -nokeeptmp -tmpdir  
>> /var/tmp/nu_correct_2481/ nu/nu0.mnc nu/nu1.imp
>>
>> expected floating-point argument for "-const" but got"DEBUG: state of  
>> _s: 0
>> DEBUG: state of _s: 0
>> DEBUG: state of path: /tmp/test
>> DEBUG: state of _s: 0
>> 0"
>
> This is a goof on our part.  Apply the following diff to EBTKS,  
> rebuild and install it,
> then rebuild N3.
>
> -Steve
>
> Index: ChangeLog
> ===================================================================
> RCS file: /software/source/libraries/EBTKS/ChangeLog,v
> retrieving revision 1.4
> retrieving revision 1.5
> diff -u -b -B -r1.4 -r1.5
> --- ChangeLog	17 Nov 2003 04:07:51 -0000	1.4
> +++ ChangeLog	21 Nov 2003 20:38:44 -0000	1.5
> @@ -1,3 +1,8 @@
> +2003-11-21  Steve ROBBINS  <stever@bic.mni.mcgill.ca>
> +
> +	* templates/CachedArray.cc: Remove debugging statements
> +	erroneously left in code.
> +
>  2003-11-14  Steve ROBBINS  <stever@bic.mni.mcgill.ca>
>
>  	* configure.ac: Set version to 1.0.
> Index: templates/CachedArray.cc
> ===================================================================
> RCS file: /software/source/libraries/EBTKS/templates/CachedArray.cc,v
> retrieving revision 1.5
> retrieving revision 1.6
> diff -u -b -B -r1.5 -r1.6
> --- templates/CachedArray.cc	17 Nov 2003 04:07:52 -0000	1.5
> +++ templates/CachedArray.cc	21 Nov 2003 20:38:44 -0000	1.6
> @@ -12,9 +12,9 @@
>                express or implied warranty.
>   
> ----------------------------------------------------------------------- 
> -----
>  $RCSfile: CachedArray.cc,v $
> -$Revision: 1.5 $
> +$Revision: 1.6 $
>  $Author: stever $
> -$Date: 2003/11/17 04:07:52 $
> +$Date: 2003/11/21 20:38:44 $
>  $State: Exp $
>   
> ----------------------------------------------------------------------- 
> ---*/
>  #include <config.h>
> @@ -478,9 +480,6 @@
>  {
>    assert(_size);
>
> -  cout << "DEBUG: in median of CachedArray" << endl;
> -  cout << "DEBUG: _size = " << _size << endl;
> -
>    if (_size <= _blockSize) {
>      if (!_blocks[0])
>        _read(0);
> @@ -503,7 +502,6 @@
>        _read(0);
>      return (*_blocks[0])(_size).medianVolatile();
>    }
> -  cout << "DEBUG: histMedian = " << _histMedian() << endl;
>    return _histMedian();
>  }
>
> @@ -723,7 +721,6 @@
>  void
>  CachedArray<Type>::_openStream()
>  {
> -  cout << "DEBUG: state of _s: " << _s.is_open() << endl;
>    if (_s.is_open())
>      _self->_s.close();
>
> @@ -734,10 +731,7 @@
>      _s.open(path, ios::in|ios::out);
>      //    _s.open(path, ios::in);
>
> -    cout << "DEBUG: state of path: " << path << endl;
>      unlink(path);
> -
> -    cout << "DEBUG: state of _s: " << _s.is_open() << endl;
>      //assert(_s.is_open());
>
>      // Create file at requested size
>
>
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