[MINC-development] dcm2mnc issues

Cecile Madjar cecile.madjar at mcin.ca
Fri Apr 30 10:02:44 EDT 2021


Hi JP,

This is great news! Thank you. Let me know once it is part of the MINC
tools.

Is there a way to obtain the dcm2mnc binaries for Ubuntu and CentOS at
the same time by any chance?

Thank you again,

Cécile

On Thu, Apr 29, 2021 at 1:05 PM Jean-Philippe Coutu <jp at biospective.com>
wrote:

> Hi Cecile,
>
> We have been modifying dcm2mnc actively internally over the past four
> years without having the bandwidth to generate pull requests to the
> minctools github repository. I am preparing a (sizeable) pull request to
> the minctools github repository that includes all of our changes, which I
> believe from my experience is likely to fix at least two of the three
> issues you have opened.
>
> Best,
> JP
>
> From: Cecile Madjar <cecile.madjar at mcin.ca>
>> Date: Fri, Apr 23, 2021 at 5:22 PM
>> Subject: [MINC-development] dcm2mnc issues
>> To: MINC development discussion & planning <
>> minc-development at bic.mni.mcgill.ca>, <minc-users at bic.mni.mcgill.ca>
>>
>>
>> Hello,
>>
>> A while back, we logged several critical dcm2mnc issues on GitHub. We are
>> still experiencing those issues in several of our LORIS projects. I wanted
>> to follow up with the MINC community regarding those issues to see if
>> dcm2mnc is still supported and if there will be any developments regarding
>> those issues.
>>
>> Here is the list of logged issues:
>> https://github.com/BIC-MNI/minc-tools/issues/created_by/cmadjar
>>
>> As the imaging world progresses, we are encountering those problematic
>> issues in more of our LORIS projects and we need to provide our users
>> solutions regarding these issues. If there is no possibility to fix
>> dcm2mnc, then we may have to consider moving away from MINC, which we would
>> prefer avoiding for obvious reasons.
>>
>> Please, let us know your thoughts on this. Help regarding these issues
>> would be greatly appreciated.
>>
>> Best regards,
>>
>> Cécile
>>
>>
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>> MINC-development at bic.mni.mcgill.ca
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>>
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