[Loris-dev] LORIS-MRI - filterParameters() function of the profile file

[Cecile Madjar]

Hi all,

Since I have not heard of any project that customized the function*
filterParameters() *present in their profile file, *note that this function
will be removed from the profileTemplate in LORIS-MRI and moved to the
LORIS-MRI scripts instead*.

Thank you!

Cécile

On Fri, Apr 6, 2018 at 11:39 AM, Cecile Madjar <cecile.madjar at gmail.com>
wrote:

> Dear LORIS-MRI users,
>
> We are planning on moving the filterParameters() function out of the
> profile file (often called 'prod') present in the dicom-archive/.loris-mri
> folder.
>
> However, before doing this change, we would like to make sure that no
> project has customized this function in their profile file. Here is the
> code for the function.
>
> # ----------- OPTIONAL SUBROUTINE
> # Takes a NeuroDB::File object, and manipulates its parameters
> # in this case, removes all parameters of length > 1000
> sub filterParameters {
>     my $fileRef = shift;
>     my $file = $$fileRef;
>     my $parametersRef = $file->getParameters();
>
>     foreach my $key (keys %{$parametersRef}) {
>         if(($key ne 'header') && (length($parametersRef->{$key}) > 1000)) {
>             #print "\n\tFilter active on: $key with length ".length($parametersRef->{$key})."\n";
>             $file->removeParameter($key);
>         }
>     }
> }
>
> Could you please let me know whether you have customized this function for
> your project?
>
> If by the end of next week, I have not heard of any project that has
> customized this function, I will go ahead and move it out of the profile
> file to include it in the LORIS-MRI scripts instead.
>
> Let me know.
> Best wishes,
>
> Cécile
>
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