[Loris-dev] LORIS data model/schema

[Christine Rogers]

Hi Rachad,

There are a few steps which the Install script did not complete for you
because it didn't explicitly detect an Ubuntu (or CentOS) OS running.
These steps will likely work for Debian when copied from the install script
(with appropriate values populated) and manually run, for the following
steps:

- Installing composer - line 82 in tools/install.sh :
cd /var/www/loris/tools
curl -sS https://getcomposer.org/installer | php
mv composer.phar ../composer
cd /var/www/loris/
./composer install --no-dev

- Setting directory permissions:
e.g. line 193: sudo chown www-data.www-data
../modules/document_repository/user_uploads
and 206: sudo chgrp www-data logs

- Configuring Apache: line 450+

Troubleshooting this by checking the messages you saw from your install
script log is a great place to start.
Best,
Christine

--
christine.rogers at mcgill.ca
LORIS data systems | loris.ca
McGill Centre for Integrative Neuroscience| MCIN.ca
McConnell Brain Imaging Centre
Montreal Neurological Institute
McGill University | Montreal | Canada


On Mon, Dec 7, 2015 at 1:00 PM, Rachad El-Badrawi <
relbadrawi at indocresearch.org> wrote:
>
> Hi Samir and Christine,
>
>
>
> Thanks for your responses.
>
>
>
> The Debian (Release 7.7, Wheezy) installation does go to completion, at
least as far as the backend table creation, but it does choke at some
points. Here are a couple of snapshots from the installation output, when
running the install.sh script. :
>
>
>
> ....
>
> Debian Linux distribution detected. We currently do not support this.
Please manually set the permissions for user_uploads directory in
>
> ../modules/document_repository
>
> ....
>
> ./install.sh: line 446: composer: command not found
>
> Debian Linux distribution detected. We currently do not support this.
Please configure Apache manually.
>
>
>
> So, obviously, the front end of the system was not automatically set. I
did not have the chance, yet, to do this manually or to investigate the
reason behind this.
>
>
>
> Regards,
>
> Rachad
>
>
>
>
>
> From: Samir Das [mailto:samirdas99 at gmail.com]
> Sent: December 6, 2015 12:51 PM
> To: Christine Rogers
> Cc: Rachad El-Badrawi; loris-dev at bic.mni.mcgill.ca
> Subject: Re: [Loris-dev] LORIS data model/schema
>
>
>
> Hi Rachad,
>
>
>
> We used to install LORIS on Debian, but it should work the same as the
Ubuntu install. Let me know if you have some specific issues when
installing.
>
>
>
> Cheers,
>
>
>
> Samir Das
>
>
>
> On Fri, Dec 4, 2015 at 5:37 PM, Christine Rogers <
christine.rogers at mcgill.ca> wrote:
>
> Hello,
>
> Thank you for your questions.
>
> 1) We don't presently have a freely available example dataset that can be
loaded to simulate a complete LORIS project.  We may be interested in
providing this in future, and will keep this suggestion in mind.
>
>
>
> 2) The similarities between Debian and Ubuntu should indicate success for
a Debian installation, but we don't at present have any specific
implementation that can provide detailed guidance.  Perhaps someone in the
user community has some input?
>
>
>
> Best,
>
> Christine
>
>
>
> On Thu, Dec 3, 2015 at 3:13 PM, Rachad El-Badrawi <
relbadrawi at indocresearch.org> wrote:
>
> Hi All,
>
>
>
> 1) I was wondering if there is a comprehensive freely available
project/study that uses LORIS, that can be used to show how the different
tables/fields in the LORIS schema are used. I am basically looking for a
MySQL dump that represents that study which I can upload into a MySQL
instance that I have.
>
>
>
> 2) Anyone had 'complete' success in installing LORIS on a Linux - Debian
(VM). If so, please share any tips.
>
>
>
> Thanks for the feedback.
>
>
>
> Regards,
>
> Rashad Badrawi
>
>
>
>
>
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>
>
>
>
>
> --
>
>
> christine.rogers at mcgill.ca
> LORIS data systems | loris.ca
> McGill Centre for Integrative Neuroscience| MCIN.ca
>
> McConnell Brain Imaging Centre
> Montreal Neurological Institute
>
> McGill University | Montreal | Canada
>
>
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