[MINC-users] HDF5 target installation failure

[Spitzer, Hannah]

Hi Bert,

yes, the develop branch now works for me.

Thanks!
Hannah

________________________________________
From: minc-users-bounces at bic.mni.mcgill.ca [minc-users-bounces at bic.mni.mcgill.ca] on behalf of Robert D. Vincent [bert at phalarope.com]
Sent: Friday, June 23, 2017 3:22 PM
To: MINC users mailing list
Subject: Re: [MINC-users] HDF5 target installation failure

Hi again,

I've updated the link in the develop branch of minc-toolkit-v2 if you want
to give it another try.

    -bert

On Wed, Jun 21, 2017 at 10:24 PM, Robert D. Vincent <bert at phalarope.com>
wrote:

> Hi Konrad,
>
> For some reason the HDF5 download is failing on that system - I think they
> have released a new version recently, and rendered the old download link
> obsolete.
>
> Someone here will have to update the HDF5 link for minc-toolkit-v2
>
>       -bert
>
> On Wed, Jun 21, 2017 at 2:24 PM, K. Wagstyl <kw350 at cam.ac.uk> wrote:
>
>> Hello,
>>
>> I have been trying to install the minc-toolkit-v2 from GitHub on my
>> machine. However the installation fails on the HDF5 target:
>>
>> [  2%] Performing download step (download, verify and extract) for 'HDF5'
>> -- verifying file...
>>        file='/homeb/jinm14/jinm1403/library_sources/minc-toolkit-v
>> 2/build/HDF5-prefix/src/hdf5-1.8.18.tar.bz2'
>> -- MD5 hash of
>>     /homeb/jinm14/jinm1403/library_sources/minc-toolkit-v2/build
>> /HDF5-prefix/src/hdf5-1.8.18.tar.bz2
>>   does not match expected value
>>     expected: '29117bf488887f89888f9304c8ebea0b'
>>       actual: 'd41d8cd98f00b204e9800998ecf8427e'
>> -- File already exists but hash mismatch. Removing...
>> -- downloading...
>>        src='https://support.hdfgroup.org/ftp/HDF5/current18/src/
>> hdf5-1.8.18.tar.bz2'
>>        dst='/homeb/jinm14/jinm1403/library_sources/minc-toolkit-v2
>> /build/HDF5-prefix/src/hdf5-1.8.18.tar.bz2'
>>        timeout='none'
>> error: downloading 'https://support.hdfgroup.org/
>> ftp/HDF5/current18/src/hdf5-1.8.18.tar.bz2' failed
>>   status_code: 22
>>   status_string: "HTTP response code said error"
>>
>> I have checked the hdf5 version under this link was updated a few days
>> ago to 1.8.19 . How do I tell make to use expect the new version? Should it
>> be able to autodetect this?
>>
>> Thanks,
>> Konrad (sent on behalf of Hannah Spitzer)
>>
>> _______________________________________________
>> MINC-users at bic.mni.mcgill.ca
>> http://www.bic.mni.mcgill.ca/mailman/listinfo/minc-users
>>
>
>
_______________________________________________
MINC-users at bic.mni.mcgill.ca
http://www.bic.mni.mcgill.ca/mailman/listinfo/minc-users


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