[MINC-users] Hyperintensities in T1 images

[Vladimir S. FONOV]

Did you try bestlinreg_s -nmi ?

On 16-03-02 02:24 PM, Gabriel A. Devenyi wrote:
> Hi all,
>
> I'm working with some data where the scan range is very large, and fat
> deposits (in the neck) or the subject's shoulders have far higher
> intensities than the brain tissue.
>
> This breaks bestlinreg and similar "blur and register" types of methods.
>
> Can anyone recommend a way to "tamp down" these high intensity regions?
> (Note, I already tried cropping and the image size variation makes this
> tedious to do manually).
>
> Thanks!
>


-- 
Best regards,

  Vladimir S. FONOV ~ vladimir.fonov <at> gmail.com