[MINC-users] Building RMINC

[Andrew Wood]

Hi Christopher,

I'm compiling against release-1.0.08 of minc-toolkit.  I've never really
understood the differences between minc-toolkit and minc-toolkit-v2, but I
can try switching to that.

I'm on Ubuntu 12.04 (64-bit) with R version 3.2.5.

Cheers,
Andrew

On Thu, Jun 9, 2016 at 4:28 PM, Christopher Hammill <
christopher.hammill at sickkids.ca> wrote:

> Hi Andrew,
>
> I have been building RMINC against minc-toolkit-v2 typically, if you have
> the option I'd recommend trying to build against that. What platform are
> you installing on? I can try to investigate the problem.
>
> Cheers,
>
> Chris
> ________________________________________
> From: minc-users-bounces at bic.mni.mcgill.ca [
> minc-users-bounces at bic.mni.mcgill.ca] on behalf of Andrew Wood [
> andrew at biospective.com]
> Sent: Thursday, June 09, 2016 2:44 PM
> To: MINC users mailing list
> Subject: [MINC-users] Building RMINC
>
> Hi all,
>
> I've been having trouble building RMINC (git tag v1.4.1.1):
>
> $ R CMD INSTALL -l /data/scratch/
> --configure-args='--with-build-path=install/minc-toolkit/' ./RMINC/
>
> I get a few compiler warnings in minc_anova.c, then the installation
> crashes:
>
> ** testing if installed package can be loaded
> Error in dyn.load(file, DLLpath = DLLpath, ...) :
>   unable to load shared object '/data/scratch/RMINC/libs/RMINC.so':
>   /data/scratch/RMINC/libs/RMINC.so: undefined symbol: ncopts
> Error: loading failed
> Execution halted
>
>
> Anyone have any idea what I'm doing wrong?
>
> Thanks,
> Andrew
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