[MINC-users] The story of "bestlinreg"?

[Vladimir S. FONOV]

no, the real reason is now forgotten. But I also happen to have nlfit_l


On 16-02-26 01:46 PM, Alex Zijdenbos wrote:
> I stand corrected then. Vladimir 'S' Fonov :)
>
> On Fri, Feb 26, 2016 at 1:31 PM, Vladimir S. FONOV <vladimir.fonov at gmail.com
>> wrote:
>
>> No, both are mine.
>>
>>
>> On 16-02-26 01:07 PM, Alex Zijdenbos wrote:
>>
>>> I always thought the 's' referred to Steve Robbins, who did some parameter
>>> optimization on these registration protocol (bestlinreg_s and nlfit_s)?
>>> That not correct then?
>>>
>>> On Fri, Feb 26, 2016 at 12:32 PM, Vladimir S. FONOV <
>>> vladimir.fonov at gmail.com> wrote:
>>>
>>> Hello,
>>>>
>>>> bestlinreg_s and _s2 are my alternations of the original script.
>>>>
>>>> All three are part of minc_toolkit , see
>>>> https://github.com/BIC-MNI/EZminc/tree/master/scripts
>>>>
>>>>
>>>>
>>>> On 16-02-26 12:22 PM, Claude LEPAGE wrote:
>>>>
>>>> Hi,
>>>>>
>>>>> A few historical notes here...
>>>>>
>>>>> Oliver and I are at the origin of the creation of bestlinreg.pl.
>>>>> The motivation was to split the original mritotal script into a
>>>>> module for linear registration and one for non-linear registration.
>>>>> Being modest, we, of course, called it "best". bestlinreg.pl typically
>>>>> lives within the CIVET pipeline and hasn't be formally added to
>>>>> the mni autoreg package. bestlinreg.pl has thus evolved with the
>>>>> versions of CIVET over the years, although we have not renamed it
>>>>> bestbestlinreg.pl.
>>>>>
>>>>> I don't know where bestlinreg, bestlinreg_s, and bestlinreg_s2 are
>>>>> from. Likely, they are other flavours of bestlinreg.pl.
>>>>>
>>>>> Claude
>>>>>
>>>>>
>>>>>
>>>>> Hi minc-users,
>>>>>>
>>>>>> I was wondering if anyone had any background about the various versions
>>>>>> of
>>>>>> bestlinreg around.
>>>>>> So far I've seen
>>>>>> bestlinreg
>>>>>> bestlinreg.pl
>>>>>> bestlinreg_s
>>>>>> bestlinreg_s2
>>>>>>
>>>>>> I've looked over the help and diffed the various versions together and
>>>>>> I
>>>>>> see some differences, but its not clear to me why so many exist or if
>>>>>> they're intended for different purposes.
>>>>>>
>>>>>> Does anyone have the story of their pedigree?
>>>>>>
>>>>>> Thanks!
>>>>>>
>>>>>> --
>>>>>> Gabriel A. Devenyi B.Eng. Ph.D.
>>>>>> Research Computing Associate
>>>>>> Computational Brain Anatomy Laboratory
>>>>>> Cerebral Imaging Center
>>>>>> Douglas Mental Health University Institute
>>>>>> McGill University
>>>>>> t: 514.761.6131x4781
>>>>>> e: gdevenyi at gmail.com
>>>>>>
>>>>>> _______________________________________________
>>>>> MINC-users at bic.mni.mcgill.ca
>>>>> http://www.bic.mni.mcgill.ca/mailman/listinfo/minc-users
>>>>>
>>>>>
>>>>>
>>>> --
>>>> Best regards,
>>>>
>>>>    Vladimir S. FONOV ~ vladimir.fonov <at> gmail.com
>>>> _______________________________________________
>>>> MINC-users at bic.mni.mcgill.ca
>>>> http://www.bic.mni.mcgill.ca/mailman/listinfo/minc-users
>>>>
>>>>
>>>> _______________________________________________
>>> MINC-users at bic.mni.mcgill.ca
>>> http://www.bic.mni.mcgill.ca/mailman/listinfo/minc-users
>>>
>>>
>>
>> --
>> Best regards,
>>
>>   Vladimir S. FONOV ~ vladimir.fonov <at> gmail.com
>> _______________________________________________
>> MINC-users at bic.mni.mcgill.ca
>> http://www.bic.mni.mcgill.ca/mailman/listinfo/minc-users
>>
>>
> _______________________________________________
> MINC-users at bic.mni.mcgill.ca
> http://www.bic.mni.mcgill.ca/mailman/listinfo/minc-users
>


-- 
Best regards,

  Vladimir S. FONOV ~ vladimir.fonov <at> gmail.com